Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00273 ATGGAGCTCTTGCACCCTCCACTCGCAGCAGACGCCCTCCACCGCTACTCTCCTCCTCCCTCCACGAGCTCGCGCGTTGAGTTCCACGCGCTGGCAACCCCTCCTGAAGCCGCCGCTGAAGAGGACAAGGTGCACGTGGCAGTTGGCAAGTCGGTGGGAAAAGGTGCCACTTTGCTTCAATGGGCTTTCTCAAACTTCACCAACCCACACATTCTTTTGCTTCATGTTCATCAACCTTCTCCTTTCATCCCTACACTATTAGGGAAGTTACCAGCATCTCAGGCTAATCCTGAAGTGGTCTCTGCTTTTAGAAGAGAGGAAAAAGAACAGGCCATGAGGCTTTTGGACAATTACCTGAGAATTTGCCGTGCAGCTAAGGTTAAGGCAAGCTTTATGATGACGGAAGCTGATCAGGTCCAGAAAGGGATTGTTGATTTGGTTGTAGGGCATAATATTAGGAGGCTTGTTATTGGAGCAATACCCGAAGGTTGGATGAAAGTCAAAAGGAATTCCAGGAAAGCAAATTATGCTGCCAAAAATGCACCCCCCTTCTGTAAAATATGGTTTATCTATAGAGGTAAACATATTTGGACAAGAGAAGCTTCTGAAAAACCTTGTTCTTTATCACCGTGTGAAACAATTGAAACAGAAGGCACTTTTGCTGCCGAATCAACTACATCCAGCGGTCCATTGCCCCAAAATTCTGCTGAGAGTTCTTCAGATACTCATTTAGAGGCTGAAGAAGAAAGAGTTAATAGTCAACTTGTTGAAGTCAAACAAGAAGCTGATGAAGCAGCAGATGAGTCTTTTGTTGAGCTATTGAAGTTGGAAGCTGAAGCCACTGAGGCCATAAGGAAGGTCAATTTGTTTGAATCTGCTCATGCACAGGAAGTAAAGCTCAGACAAGAGGCAGAGGATGAGTTGAGAACCACAGTAAAGGATCAACAAAAGCTCTTGGATGAGAATGAAGAAATTGGTAGTGAGTTACAAAGAACCATGAGAAGTATTGCCATCATAAACAGTTGTGTGCAGGAAACAGACCATAGGCGAGATGCAGCTGAAGATGAACTATCACTAATTCAAGCATCCATCTCCACACTCTGGCACGAAAAACAGCAGATCAGGCGACAGAAAATGGAAGCCATCCGCTGGCTGGACCGGTGGAAAAGCCGTGGGCAAGTTGGAGTTGCTCATTGTAATGGAGTTGTAGGATTTGCTGAGGAGCTACCTGAGATAGCAGAATTTTCATTATTGGATATTCAAAATGCCACATGCAATTTTTCTGAAAGCTTTAAAATTAAGGAGGGTGGATATGGCGCTATTTATAAGGGAGAAATGTTGGGTAGGACAGTTGCTATAAGAAAGCTCCATTCTCACAATTTGCAAGCACCTTCACAGTTTCACCAAGAGGTTCAAGTTCTTGGTAGTTTTCAGCACCCTCATCTGTTGACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCACTTGTATATGAGTACTTGCCCAATGGAAGTATTCAAGACAGCCTTCTAAGAAGGAGCAACATTTCCCCTTTAACATGGAATATCCGAACACGATGGATTGCTGAAATTGCTAGTGCTATCTGCTTTTTACATTCTTCCAAACCGGAAACTATTATTCATGGTGATCTGAATCTTGACATCATACTTCTTGATTCTGCACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGATTCTCTCTATCTTCCTAGTTTTGGCTTGGAAACTGAGCCAAGGGGTTCTTTCACATATACAGATCCAGAGTTTCAGAGAACTGGACTAA 1839 0.4241 MELLHPPLAADALHRYSPPPSTSSRVEFHALATPPEAAAEEDKVHVAVGKSVGKGATLLQWAFSNFTNPHILLLHVHQPSPFIPTLLGKLPASQANPEVVSAFRREEKEQAMRLLDNYLRICRAAKVKASFMMTEADQVQKGIVDLVVGHNIRRLVIGAIPEGWMKVKRNSRKANYAAKNAPPFCKIWFIYRGKHIWTREASEKPCSLSPCETIETEGTFAAESTTSSGPLPQNSAESSSDTHLEAEEERVNSQLVEVKQEADEAADESFVELLKLEAEATEAIRKVNLFESAHAQEVKLRQEAEDELRTTVKDQQKLLDENEEIGSELQRTMRSIAIINSCVQETDHRRDAAEDELSLIQASISTLWHEKQQIRRQKMEAIRWLDRWKSRGQVGVAHCNGVVGFAEELPEIAEFSLLDIQNATCNFSESFKIKEGGYGAIYKGEMLGRTVAIRKLHSHNLQAPSQFHQEVQVLGSFQHPHLLTLLGVCPEAWSLVYEYLPNGSIQDSLLRRSNISPLTWNIRTRWIAEIASAICFLHSSKPETIIHGDLNLDIILLDSALXXXXXXXXXXXXXXXXXXXXXKILSIFLVLAWKLSQGVLSHIQIQSFRELD 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00273 612 Pfam Protein tyrosine and serine/threonine kinase 432 559 IPR001245 GO:0004672|GO:0006468
Adu03g00273 612 Coils Coil 583 583 - -
Adu03g00273 612 CDD STK_N 43 193 - -
Adu03g00273 612 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 56 164 - -
Adu03g00273 612 MobiDBLite consensus disorder prediction 217 259 - -
Adu03g00273 612 ProSiteProfiles Protein kinase domain profile. 427 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00273 612 Coils Coil 557 561 - -
Adu03g00273 612 SUPERFAMILY Protein kinase-like (PK-like) 411 560 IPR011009 -
Adu03g00273 612 PANTHER OS02G0152300 PROTEIN 33 217 - -
Adu03g00273 612 PANTHER OS02G0152300 PROTEIN 233 561 - -
Adu03g00273 612 Coils Coil 244 268 - -
Adu03g00273 612 MobiDBLite consensus disorder prediction 217 240 - -
Adu03g00273 612 Gene3D HUPs 37 166 IPR014729 -
Adu03g00273 612 MobiDBLite consensus disorder prediction 241 259 - -
Adu03g00273 612 Coils Coil 301 321 - -
Adu03g00273 612 PANTHER OS10G0100500 PROTEIN 33 217 - -
Adu03g00273 612 PANTHER OS10G0100500 PROTEIN 233 561 - -
Adu03g00273 612 Gene3D Transferase(Phosphotransferase) domain 1 413 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00273 Adu-Chr3 2513816 2518234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00273 41 561 U-box Gene Family AT2G45910 33.106 4.82e-91 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Adu03g00273 PK_Tyr_Ser-Thr 3.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00273 - - aip:107629106 878.241