Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00268 ATGGTTTTCTCTTCTATTCCAGTCTATGTAGATCCTCCCAATTGGCAGCAGCAACCGAATCATCATCAAGCAAATGTCAATGATAATCCTCACTTACTTCCGCCGCTACCCCCACAGGTCCAGGCAGGACCTGTGGGAGGAGGTGGCGCAATTGCTGGCTCGATCAGACCTGGGTCAATGGCTGATCGAGCCAGGCTAGCAAAGATACCACCTCCAGAGGCTGCCCTCAAGCGTTACTGGACAAGAGGTGGTGCTCTGAGGAACGTTCCGGTGGGGGGTGGTTGCCGCCGTAACAAGAAGAACAAGAGGAGTAGTAGCCGCTCGAAATCTCCACCAAACAATAACAATGAAAAGCAACAATCTTCGAGTGCAATTCCTTCAAACAACATCCCTCCTCATGAGCTGATTGGTCATCAACCACCAAACCTTCCTTTCATGGCTTCTCTCCAGAATCATCTTAGCCGCTATGGAGTTGCTTCAAACATGGGTCTGAGCTTAACGGATCATCATCATCCTCAGATGGGGTTTGTTGGTAATTCTGCTTCTGCTATAGCTGCAAGTAATGGAGTAGTAGTGGATCAGTGGCGGCTGCAGCAGTTTCCGTTCTTAAACGGTTTTGATTCGAATTCTTCTTCAGCTGCAGTAGCATCATCAATATCATACCCTAATACTTTTCATCATGAAAATGATCAAGGTTCTTCAGGCTTGGTTGACATAGCTGGAAATTCTAGGGTTAATAATCAGATGCAACCACCAGTGAAAATGGAAGAGAACGGATCAAGACCAACAACAACAACCACAACCAACTTGAATGTCTCTCATCATCAATACTATTCTTGGAACACTGATATGTCAGCTCTAGCTGCTTCTTCTTCCACTCCTCATAATCTCTTATAA 897 0.4593 MVFSSIPVYVDPPNWQQQPNHHQANVNDNPHLLPPLPPQVQAGPVGGGGAIAGSIRPGSMADRARLAKIPPPEAALKRYWTRGGALRNVPVGGGCRRNKKNKRSSSRSKSPPNNNNEKQQSSSAIPSNNIPPHELIGHQPPNLPFMASLQNHLSRYGVASNMGLSLTDHHHPQMGFVGNSASAIAASNGVVVDQWRLQQFPFLNGFDSNSSSAAVASSISYPNTFHHENDQGSSGLVDIAGNSRVNNQMQPPVKMEENGSRPTTTTTTNLNVSHHQYYSWNTDMSALAASSSTPHNLL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00268 298 MobiDBLite consensus disorder prediction 87 143 - -
Adu03g00268 298 Pfam Dof domain, zinc finger 77 100 IPR003851 GO:0003677|GO:0006355
Adu03g00268 298 MobiDBLite consensus disorder prediction 13 27 - -
Adu03g00268 298 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 77 292 - -
Adu03g00268 298 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 77 - -
Adu03g00268 298 MobiDBLite consensus disorder prediction 107 129 - -
Adu03g00268 298 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 77 292 IPR045174 GO:0003700|GO:0006355
Adu03g00268 298 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 77 IPR045174 GO:0003700|GO:0006355
Adu03g00268 298 MobiDBLite consensus disorder prediction 13 56 - -
Adu03g00268 298 MobiDBLite consensus disorder prediction 245 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00268 Adu-Chr3 2481683 2482913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00268 1 102 C2C2-Dof Transcription Factor Family AT2G37590 41.379 3.65e-19 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu03g00268 zf-Dof 1.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00268 - - aip:107629110 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01247 08 21521848 21522970 Adu03g00268 03 2481683 2482913 PCT