Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00240 ATGGTTGAAGAGGAATTCCGAAAGGGTCCTTGGACCGAACAAGAGGACTTCAAACTTGTGTCTTATGTTGGCTTATTTGGGGATCGTAGATGGGACTTTATAGCTAAGGTTTCAGGTTTGAATAGGACAGGTAAGAGTTGCAGGTTGCGATGGGTTAATTATCTCCATCCTGGTCTCAAACATGGTAAGATGTCTCCCCACGAACAACAACTTGTCATGCACCTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCAAGAAAGTTGCCAGGGCGAACAGACAATGAGATCAAGAACTTTTGGAGGACTCAGATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTGCAACCACACAATCATCTCCATCATCTTCGTCTACTAGTTACCAGTCCTCATCTTCTTCCAACAAGGATATTGGGGAAGAGAGCTTCTACGACACTGGAGGGCATAATGGTAATAACAACAACATCACTAATAACACGATGGTGAAAGAAGATGATGGAATAATAATTAATAGTGATAGTAACAATGTTGTTGATGATGATTACTCTATGGATGATATATGGAATGATATCGCCATGTCTGAACAACACAACAACTTTATTTCTTCTTCTTCTTCTTCTTCAGAACCACTGCCACTATGGATGATCATGGATAATCAAGAACAAGAACAAAGTAAAGTCTTATTCCCTTCTTCCTATGAACCACTCTTAACCACTTAA 732 0.4098 MVEEEFRKGPWTEQEDFKLVSYVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKHGKMSPHEQQLVMHLHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKRAPATTQSSPSSSSTSYQSSSSSNKDIGEESFYDTGGHNGNNNNITNNTMVKEDDGIIINSDSNNVVDDDYSMDDIWNDIAMSEQHNNFISSSSSSSEPLPLWMIMDNQEQEQSKVLFPSSYEPLLTT 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00240 243 SMART sant 7 57 IPR001005 -
Adu03g00240 243 SMART sant 60 108 IPR001005 -
Adu03g00240 243 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Adu03g00240 243 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 214 IPR044676 GO:0003700|GO:0006355|GO:0043565
Adu03g00240 243 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Adu03g00240 243 MobiDBLite consensus disorder prediction 106 163 - -
Adu03g00240 243 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Adu03g00240 243 Pfam Myb-like DNA-binding domain 62 104 IPR001005 -
Adu03g00240 243 Gene3D - 8 60 - -
Adu03g00240 243 Gene3D - 65 107 - -
Adu03g00240 243 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 3 214 - -
Adu03g00240 243 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Adu03g00240 243 CDD SANT 63 104 IPR001005 -
Adu03g00240 243 MobiDBLite consensus disorder prediction 116 163 - -
Adu03g00240 243 CDD SANT 10 55 IPR001005 -
Adu03g00240 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Adu03g00240 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00240 Adu-Chr3 2274294 2275308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00240 1 198 MYB Transcription Factor Family AT5G59780 59.596 8.26e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g00240 Myb_DNA-binding 5.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00240 K09422 - mnt:21394127 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00240 03 2274294 2275308 Adu08g01263 08 21660511 21662293 PCT