Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00238 ATGTTTGCACTTTTCGTGGCGGTTTCCGTCGGTGCTAACATCTCCGGTGGCCATGTCAACCCTGCCGTCACATTTGGCGCCTTTGTCGGTGGCCACATTACCCTCCTTAGAAGCATTTTGTACTGGATTGCTCAGTTGCTTGGCTCCATTGTTGCTTGCTTGCTCCTTAAATTCGCCACTGGTGGATTGGAAACATCTGCATTTGCACTTTCATCTGGGGTTGGAGCAGCAAATGCATTAGTTTTTGAGATAGTGATGACTTTTGGGTTGGTGTACACGGTTTATGCAACTGCAGTGGACCCAAAGAAGGGTGACATTGGAATAATTGCACCAATTGCAATTGGCTTCATTGTTGGTGCAAACATCTTGGCTGGTGGTGCCTTTGATGGTGCATCCATGAACCCAGCAGTGTCATTTGGGCCTGCTGTAGTTAGCTGGACCTGGGCCAACCATTGGGTCTATTGGGTTGGCCCATTTATTGGTGCAGGAATTGCTGCACTTGTCTATGAGCTTTTCTTCATCAACCAAAACACTCATGAGCAGCTTCCAACCACAGATTATTGA 564 0.4752 MFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSIVACLLLKFATGGLETSAFALSSGVGAANALVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWVGPFIGAGIAALVYELFFINQNTHEQLPTTDY 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00238 187 SUPERFAMILY Aquaporin-like 2 179 IPR023271 -
Adu03g00238 187 PANTHER AQUAPORIN-8 2 187 IPR034294 -
Adu03g00238 187 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 2 187 - -
Adu03g00238 187 ProSitePatterns MIP family signature. 18 26 IPR022357 -
Adu03g00238 187 Pfam Major intrinsic protein 2 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g00238 187 Gene3D Glycerol uptake facilitator protein. 1 187 IPR023271 -
Adu03g00238 187 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g00238 187 PRINTS Major intrinsic protein family signature 82 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g00238 187 PRINTS Major intrinsic protein family signature 152 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu03g00238 187 PRINTS Major intrinsic protein family signature 115 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00238 Adu-Chr3 2264975 2265624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00238 2 187 Major Intrinsic Protein MIP AT2G36830 83.333 4.92e-109 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00238 K09873 - sind:105170665 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01264 08 21663078 21664178 Adu03g00238 03 2264975 2265624 PCT