Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00236 ATGTCTTCTGAACCTGCAGAACCTGAAGCCACTTCTTTCCTAATTTTCTCAATTTTGTTTTTTTTATCTCCACTGGTTTACTTCTGGATACGGAATCTTCTCCTACATGTATTAAAATGCGTGATGAGATCTAGGAACCATGCTCATAGGGGACATGGAGATGAATTAGATATTGAAGATCCTTCTTCTCCACAGTTTCGAAACAGTGGTTTGGAATCTTCTGCTGTTCGCTCTCTTCCAATGCACCAGTTCAAGGTAAATGAAGGAGGAGAACACAAGCAGATTAACACAGACTGTGCCATTTGTCTTGGAGAGTTCGAAGAAGGGGAGTGGTTGAAACATCTTCCAAGTTGCTCCCATGGCTTCCATGTTCGGTGCGTGGTTTCGGTCTCATTCAAGTTGTCCTCTCTGTAG 414 0.4275 MSSEPAEPEATSFLIFSILFFLSPLVYFWIRNLLLHVLKCVMRSRNHAHRGHGDELDIEDPSSPQFRNSGLESSAVRSLPMHQFKVNEGGEHKQINTDCAICLGEFEEGEWLKHLPSCSHGFHVRCVVSVSFKLSSL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00236 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 135 IPR013083 -
Adu03g00236 137 SUPERFAMILY RING/U-box 98 129 - -
Adu03g00236 137 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 127 - -
Adu03g00236 137 Pfam RING-like zinc finger 98 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00236 Adu-Chr3 2254348 2254761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00236 62 127 C3H Transcription Factor Family AT2G27940 50.000 1.67e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00236 - - aprc:113859782 103.99