Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00215 ATGTATAACTGTAACGGCACATTCTGTTACGCCAATAACGACGACCATTTCCATCACATGATCACGCCAATGCATTCGTCGTCGTCGACCGGAGCCGCATCTCATCAATGGCAATTGATGATCACGAACCCGTCGGAAGCGAGCATGAGCGCAAGCAGCGGGTGTAGCACGCCGAGTTCGTTGGCGAGTTGCGGTGACACCACGAGTCAGCGCGTGAGCGCCACGAAGATGCACAAGAGCGTGAGTAGCCACTCGCTGTTGTTGCAGAATAACAATAGCAGTGGGGTCCACCACAACCGTAATCAGTTGTATCCATCCTTCTCTGCTCTTTTCTGTGAGTTTCTTAATTCCGATGACGCTCCCGTTCGCAGGGTTTACAGCACCGGTGATCTTCAGGAAGATACTTCACTATCAAGTGAGAGTAGTATGATAATAGAAGCAATGAGCAGAGCCAGTCCCTATAGCCCTGAAGAGAAGAAGATAAGAATTGAGAGATACAGAATCAAGAGAAACCAGAGGAACTTCAACAAGAAAATCAAGTATGCTTGTAGAAAAACATTGGCGGATAGCCGGCCGCGAATTAGAGGAAGATTTGCAAAGAATGATGAAATTGTGAGAAACCCTCCATCACTTGAATGGTGCCAATTTGGTGCTGCTGGGGAGGAACAAGATGAAGAAGATGAGAATAATTGGGCCAATTTATTTGATTCCTTAGACCCTGCAAATGTTGTTGCTCATCATCATCAAGAGCAACAAGATAGTTCCCCTTTCGGTGTATTCTACTAA 786 0.4644 MYNCNGTFCYANNDDHFHHMITPMHSSSSTGAASHQWQLMITNPSEASMSASSGCSTPSSLASCGDTTSQRVSATKMHKSVSSHSLLLQNNNSSGVHHNRNQLYPSFSALFCEFLNSDDAPVRRVYSTGDLQEDTSLSSESSMIIEAMSRASPYSPEEKKIRIERYRIKRNQRNFNKKIKYACRKTLADSRPRIRGRFAKNDEIVRNPPSLEWCQFGAAGEEQDEEDENNWANLFDSLDPANVVAHHHQEQQDSSPFGVFY 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00215 261 Pfam CCT motif 162 201 IPR010402 GO:0005515
Adu03g00215 261 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 43 261 IPR045281 GO:0009909
Adu03g00215 261 PANTHER CCT MOTIF PROTEIN 43 261 - -
Adu03g00215 261 ProSiteProfiles CCT domain profile. 159 201 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00215 Adu-Chr3 2085887 2087900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00215 150 200 C2C2-CO-like Transcription Factor Family AT5G24930 54.902 7.74e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g00215 CCT 6.5e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00215 - - adu:107477092 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01284 08 21864824 21866287 Adu03g00215 03 2085887 2087900 PCT