Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00203 ATGTTCGATCTTAATCTAAATGCGGATTGCGACGATTCGACTCAGAACGGTGACTCGGAAGTTGTGATGCTGTGCGAGAAGCTTCCAGAAGGTTCCTGGAACCAAATGACGGAGTCGACCGGGACATCGAACTCCTCCGTCGTCAATGCCGACGGTTCGAGCAACAACGACGACTCGTCGTGCTCAACGCGCGTCACCGACAACGCGCTCACTTTCAATTTCGGAATCCTGAAAGCGGACGACAACGGCGTCGTGACGAAGGAGCTGTTTCCGGTGAACGGAGGAGCGAACTTCGTTGATTCCGTGAACTGGCAGAAGAGTAAGTTTCAAGGAACGAACGGCTCGATTGATCTCTCGTTCAATCGGCAGGGAGTGGTGGACGGTGAGGTAAAGGTGGTTCAGGTTCAACAACCGGCGAAGAAGAGTAGAAGAGGACCAAGGTCTCGGAGCTCGCAGTACAGAGGCGTCACCTTCTATAGAAGAACAGGACGATGGGAATCGCATATCTGGGATTGCGGTAAACAAGTTTATTTGGGCGGATTCGACACTGCTCATGCTGCTGCTAGAGCCTATGATCGAGCTGCTATTAAGTTCAGAGGAGTTGAAGCTGATATCAATTTCAATCTGAGTGATTACGAGGACGATCTTAAACAGACGAAGAATCTATCCAAGGAGGAATTCGTGCACATACTCCGTCGCCAAAGCACTGGTTTCTCAAGGGGGAGTTCAAAGTACCGAGGAGTGACACTCCACAAGTGTGGCCGTTGGGAGGCTCGAATGGGACAATTCCTTGGCAAAAAGGCTTATGACAAGGCTGCTATCAAATGCAATGGAAGGGAAGCAGTGACTAACTTTGAGCCAAGTACATATGAAGGAGAGATGAAATCTCCAGCCATCAATGAAGGTGGCAGTCCTAATCTTGAACTTAATTTGGGCATAGCAACTCCAGGACATGGTCTGAAAGAAAACAGGGGGCAACTCCAGTTCCCCTGGGTCCCTTACAGCATGCATGCTGGAAGAACAATGGTGGAAACCAATGTTAATTCGGTAATTGGTAATCCATCTTCAGAAAGGCTGGTTGCAACTGAAGAGCATCCTTCTCGGTGGAATGGCGTGAATCCTAGTTTCTTTCCCAATCAGGAGAGAGCTGATAGGATCAGCATAGATCATTCCAAAGGACTCCCCGGTTGGCCATGGCAAATGCACAACCAAATCACTGCTACCCCAGTGCCTCCTTTCTCTGTTGCAGCATCATCAGGATTCTCCATCTCAGCTACATTTCCATCGAACGCCATCTTTCCGGCAAAATCCATGAACTCAACTCCCCAAAGTCTTTGTTTTCCTTCATCTGCCGCTCCTATCAGCACTGCAACTCAATATTACTACCAGGCTAAGCCCCGGCAGGCACCACCCTAG 1416 0.4944 MFDLNLNADCDDSTQNGDSEVVMLCEKLPEGSWNQMTESTGTSNSSVVNADGSSNNDDSSCSTRVTDNALTFNFGILKADDNGVVTKELFPVNGGANFVDSVNWQKSKFQGTNGSIDLSFNRQGVVDGEVKVVQVQQPAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNLSDYEDDLKQTKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFEPSTYEGEMKSPAINEGGSPNLELNLGIATPGHGLKENRGQLQFPWVPYSMHAGRTMVETNVNSVIGNPSSERLVATEEHPSRWNGVNPSFFPNQERADRISIDHSKGLPGWPWQMHNQITATPVPPFSVAASSGFSISATFPSNAIFPAKSMNSTPQSLCFPSSAAPISTATQYYYQAKPRQAPP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00203 471 SUPERFAMILY DNA-binding domain 151 209 IPR016177 GO:0003677
Adu03g00203 471 CDD AP2 152 210 IPR001471 GO:0003700|GO:0006355
Adu03g00203 471 MobiDBLite consensus disorder prediction 33 62 - -
Adu03g00203 471 Gene3D AP2/ERF domain 151 209 IPR036955 GO:0003700|GO:0006355
Adu03g00203 471 Gene3D AP2/ERF domain 243 287 IPR036955 GO:0003700|GO:0006355
Adu03g00203 471 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 441 - -
Adu03g00203 471 Pfam AP2 domain 152 200 IPR001471 GO:0003700|GO:0006355
Adu03g00203 471 ProSiteProfiles AP2/ERF domain profile. 152 208 IPR001471 GO:0003700|GO:0006355
Adu03g00203 471 CDD AP2 243 288 IPR001471 GO:0003700|GO:0006355
Adu03g00203 471 SMART rav1_2 152 214 IPR001471 GO:0003700|GO:0006355
Adu03g00203 471 SMART rav1_2 244 292 IPR001471 GO:0003700|GO:0006355
Adu03g00203 471 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 441 - -
Adu03g00203 471 SUPERFAMILY DNA-binding domain 243 287 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00203 Adu-Chr3 1944718 1948490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00203 1 428 AP2-EREBP Transcription Factor Family AT5G60120 45.553 6.38e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu03g00203 AP2 6.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00203 K09284 - gmx:100788303 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01303 08 22156363 22160599 Adu03g00203 03 1944718 1948490 PCT