Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00180 ATGGACATTGATCTAAACCATGCAGTAGTAGTGAGTAGTGAGGATGATGATGAGAGCAATGTGGAATGTGACAAAGGTGCTTCATCACCTTCTCCTTCAGGTTCTGCTATGTCTTCTTACCTTGAACTTTGGCATGCTTGTGCTGGACCTCTAACTTCACTCCCAAAGAAAGGGAATGTGGTTGTGTACTTCCCTCAAGGACACTTAGAACAAGCCTCTTCTTTCTCTCATTTCGCACCAATTGATGTGCCTAATTATGATCTTCAGCCTCAAATCCTTTGCAGGGTTGTTAATGTTCAGTTACTTGCTAATAAGGAGAATGATGAGGTTTATACTCAGATTACTTTGCTTCCCCAATCTGATGAGTTGGAAGATAAGAATTTGGAGGGTAAAGAGGTTGAGGAAATTGGAGGAGATGAAGAGGGAAATGGAGTTCCAACCTTAAAGCCAACAACTCATATGTTCTGCAAATCACTCACTGCTTCAGATACCAGCACTCATGGAGGATTCTCTGTTCCTCGCCGAGCTGCCGAAGATTGTTTTCCTCCTTTGGATTATAAACAACAAAGACCCTCTCAAGAGCTTGTAGCAAAAGACCTTCATGGTGTGGAGTGGAGATTTCGCCATATTTATAGAGGGCAACCAAGGAGGCATTTACTCACTACTGGTTGGAGTATGTTTGTTGGCCAAAAGAAACTTGTTTCTGGTGATGCAGTCCTTTTTCTAAGGGGTGAAAATGGAGAACTGAGATTGGGAATCAGAAGAGCTATTAGACCAAGAAATGGTCTTCCTGGAACAGTAATTGGAAACCAAAACTGTTATCCCAATTTTCTTTCTTCTGTTTCTGATGCAATATCCACCAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCAAGTCATGCACCCTTTGTTGTGCCATATAAAAAATATGTTAAAAGCATCAACAATCCTGTGACAATTGGGACAAGATTCAAAATGACTTTTGAAATGGATGAATCTCCAGAAAGAAGGTGTGGTGGTGGTACTGTGATTGGAATGAGTGAAGTAGATCCATATAGATGGCCTAAATCAAAGTGGAGATGCTTGATGGTTAGATGGGATGAGGATATTGATACTAATCATCAAGACCGAGTATCTCCATGGGAGATCGATCCTTTCGCTTCCCTCCCTCCTTTGAGTCTTCAGTCTTTCCCAAGACTGAAGAAACTAAGGACGGATGGGCAAGCTGCCGCTCACAGTCACCTCATCACTGCAGGGAGCAGTGGATTGGTGGACTTTGAGGAGTCTGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATGCTGGTTTTCTGTCACTCTATTATGGATGTGACACCTTAACTAACCGGCCGCGATTTGAGATGAGCCCTCTTCCACACGTAGCATCAACAACTGGAGTGAGAAGGGGCAACACTGCTGAGCTTATGAGTGTTCATCCATTCAGCTATGCAGGCTTCACAGAAACTACTAGGTTTCCAAGGGTCTTGCAAGGTCAAGAAATAGGTCCATTGAAATCCCTTAGGGGAAAAGTTGATTTGAGCCTTGGTTCTTGGGGCAAATCCAACAATAGTATTGGTTGCACCACTTTCAACTTTCATCAAGCAACCAAACCACAAGTTCTTGAATCTTCTTATTTTCCCTATGGGGATATTCACAAGAAAACTGCTCAAACCAACATGTTTTACTCGAAACCGACGAATTTCCACAGAGAGAATGTCTCCTTCAACACACATTCCAATCAAGGGGTGATCAAGAGAAGTGAAGTTGGAAGAACAGATGTTCCAAATGAGCATAAGAAGACAATGCCGGGCGAAACTTGTGCGCCGGATATGAAGATTCCAGATGACAGCAAAAATGTTAAGGCAAAGGTAAATGGCTGCAAACTATTTGGATTTCCTTTGTCTGGGGAAACTACCCCTCAAAATTTACAGAACACTGCAAAAAGGAGTTGTACTAAGGTTCACAAGCAAGGAAGCCTAGTAGGAAGAGCCATTGATCTATCAAGATTGAGCAGCTATGCTGACCTGCTGAGTGAACTCGAGAGACTTTTCGGCATGGAAGGCCTTCTTAGAGATCCTGATAAGGGATGGAGGATCCTCTACACTGATAATGAGAATGATATAATGGTTGTTGGGGATGATCCATGGCATGAGTTTTGCAATGTGGTGTGCAAGATCCATATACATTCCCAAGAAGAAGTGGAGAAGATGACAATTGGGATAATCAATGATGAAACAAATAGCAGTTTGGAAGAGGCACCAATGATTATGGAGCCTTCAAAGTCCTCCTCAGTGGGTCAACCAGATTATTATTCTCCAACAGTTCTCAAAGTCTAA 2361 0.4244 MDIDLNHAVVVSSEDDDESNVECDKGASSPSPSGSAMSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQASSFSHFAPIDVPNYDLQPQILCRVVNVQLLANKENDEVYTQITLLPQSDELEDKNLEGKEVEEIGGDEEGNGVPTLKPTTHMFCKSLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSMFVGQKKLVSGDAVLFLRGENGELRLGIRRAIRPRNGLPGTVIGNQNCYPNFLSSVSDAISTKSMFHVFYSPRASHAPFVVPYKKYVKSINNPVTIGTRFKMTFEMDESPERRCGGGTVIGMSEVDPYRWPKSKWRCLMVRWDEDIDTNHQDRVSPWEIDPFASLPPLSLQSFPRLKKLRTDGQAAAHSHLITAGSSGLVDFEESVRSPKVLQGQENAGFLSLYYGCDTLTNRPRFEMSPLPHVASTTGVRRGNTAELMSVHPFSYAGFTETTRFPRVLQGQEIGPLKSLRGKVDLSLGSWGKSNNSIGCTTFNFHQATKPQVLESSYFPYGDIHKKTAQTNMFYSKPTNFHRENVSFNTHSNQGVIKRSEVGRTDVPNEHKKTMPGETCAPDMKIPDDSKNVKAKVNGCKLFGFPLSGETTPQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSSYADLLSELERLFGMEGLLRDPDKGWRILYTDNENDIMVVGDDPWHEFCNVVCKIHIHSQEEVEKMTIGIINDETNSSLEEAPMIMEPSKSSSVGQPDYYSPTVLKV 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00180 786 MobiDBLite consensus disorder prediction 11 34 - -
Adu03g00180 786 ProSiteProfiles PB1 domain profile. 657 739 IPR000270 GO:0005515
Adu03g00180 786 SMART B3_2 155 257 IPR003340 GO:0003677
Adu03g00180 786 Pfam B3 DNA binding domain 155 256 IPR003340 GO:0003677
Adu03g00180 786 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 20 773 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu03g00180 786 PANTHER AUXIN RESPONSE FACTOR 20 773 - -
Adu03g00180 786 Gene3D - 653 746 - -
Adu03g00180 786 ProSiteProfiles B3 DNA-binding domain profile. 155 257 IPR003340 GO:0003677
Adu03g00180 786 SUPERFAMILY CAD & PB1 domains 660 736 - -
Adu03g00180 786 Gene3D - 319 391 - -
Adu03g00180 786 CDD B3_DNA 153 255 IPR003340 GO:0003677
Adu03g00180 786 SUPERFAMILY DNA-binding pseudobarrel domain 148 267 IPR015300 -
Adu03g00180 786 Gene3D - 152 257 IPR015300 -
Adu03g00180 786 Pfam Auxin response factor 282 363 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00180 Adu-Chr3 1635046 1639895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00180 34 769 B3 DNA Binding Superfamily AT5G60450 57.564 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu03g00180 B3 1.1e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00180 - - gmx:100816621 1152.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01322 08 22445345 22450201 Adu03g00180 03 1635046 1639895 PCT