Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00172 ATGGCTTCAAAGTCCAAAACCGAAAACAAGACGAAGAAGAAGAACACCAAAACCGTAACCAAACAAAATTCCAAAACCATCACCAAATCGAAGAACGAGAACAAGAACAAGAACAAGAAGAAGGAGAACGTCTCAGATAATAAGAAGAACAAGAAGAGGGAGAATGACAATGCCAACAAAAAGAACAACAAGAAGAAGAAGAAGAAGCTCACACACAGCAATGGCAACTCGAAGCACCGCGGTGGTGAATCGCTGGTTGCTCCTAGCTCCAGCTCCGAGTCACAGCAAAAGCGAGAAGTAGAATCAGTTGAACAAGAAGAGGAAGATAGCACTGTAGTCTCCAATGGACGAACCGATGGCAAAAAACCTAAGAAATCGAAGCGGAATCGGGAGGAAGTGGAAAAGGAAGACGAAGGAGACGCGAAATCGCACGTGTTTCCGATGAATCGTATAAGAACAATTGTCAAGGCCGAAGATCCCGATTTGCGCGTTTCTCAGGAAGCGATTTTCGTCGTCAACAAAGCTGCGGAGAAGTTCCTTGAACAATTTGCGCAGGACGGTTATGTTCGGTGTGTCCAAGAGCGTAGGAAATCTCTGAGCTACAAGCACCTAGCGCATGTTGTGAGTAAGCAGCGGAGATATGAATTTCTTTCTGATTTTGTTCCTGAGACATTGAAAGCTGAGGATGCATTATGA 696 0.4468 MASKSKTENKTKKKNTKTVTKQNSKTITKSKNENKNKNKKKENVSDNKKNKKRENDNANKKNNKKKKKKLTHSNGNSKHRGGESLVAPSSSSESQQKREVESVEQEEEDSTVVSNGRTDGKKPKKSKRNREEVEKEDEGDAKSHVFPMNRIRTIVKAEDPDLRVSQEAIFVVNKAAEKFLEQFAQDGYVRCVQERRKSLSYKHLAHVVSKQRRYEFLSDFVPETLKAEDAL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00172 231 Gene3D Histone, subunit A 89 223 IPR009072 GO:0046982
Adu03g00172 231 Coils Coil 27 68 - -
Adu03g00172 231 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 231 - -
Adu03g00172 231 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED 1 231 - -
Adu03g00172 231 MobiDBLite consensus disorder prediction 1 15 - -
Adu03g00172 231 SUPERFAMILY Histone-fold 93 217 IPR009072 GO:0046982
Adu03g00172 231 MobiDBLite consensus disorder prediction 77 96 - -
Adu03g00172 231 MobiDBLite consensus disorder prediction 28 61 - -
Adu03g00172 231 MobiDBLite consensus disorder prediction 1 144 - -
Adu03g00172 231 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 146 208 IPR003958 -
Adu03g00172 231 MobiDBLite consensus disorder prediction 97 144 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00172 114 207 CCAAT-HAP5 Transcription Factor Family AT1G07980 41.667 9.15e-18 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Adu03g00172 CBFD_NFYB_HMF 6.1e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00172 - - adu:107476944 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00172 03 1581331 1584250 Adu03g00172 03 1581331 1584250 ECH