LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g00143	atgatagcttgttttGAAGATGATCATTTTAACATAAAGGTGGATGATGGGGTTCGTATGAAGATTGCAGTCTCACTCGTGTTAAAGAATCATAAAATGATCAGCTATAAGATCAAAGAAAATGCTATTGAAAATCTTAATAAGCTGTATGATAATCACCATCAGGCTCCTTCTGATGATAAGTCTGAGCAACCTTTTGAGACTAAATCTGTGCTACCTGCTGAAGCTATGTCAGCAGCAGATTCTGCGGACAAGGCTGAGCCACCACTTGAGGACAAAAGTGAGAATCAAGAGGCGGTTCCTGAGGCCTATGCTTGGCACTTTAGTTCACTCGCTGACTTGCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTAAGGATTGCTTTGAGGTATATGCTTTAGTTCCTGGTCTACTTCGAGAAGAGGGAAGGACAAGATTAGGGGAGTCTATAATGGCAGTTAAGGATGCAATGAATGTTGGCTTGTCAACTGTATCAGATCCCCACAAAGCTGAAGTGATGCCAGATATATTGCCTGAAAATAAGATATATGCTGATGAAAATGTGAGAGATTGCGTTTTTACATCTGAACTGGGGACTAGTTTGAAGGGAAAGGATGAGATCAAAACATATGTTGAAGAAGTTGAAATTATAGTCCCTTCGGATACTGGTATTGGTGAAAATGAAGATGACTCTGCAATATCAGTTAGAGATGCAGTTAACTTGGATCCTCAAGTGGCTGGTGGAGCTGTTAATCTGAAGGAAAAAGACAGTGCCGAGTTCCCTTCTGTGCTTGGCCAAGATGATTCCCCACTTGGTTCAAATTCTGTTGTAATAACAAATGCTTCAATACGTGATATACAGTTAGAGTCTGCTCATGTTCAGTTTTCTAATTCTTGTGATGCTCAGACTTTACTTGAAAAGGAAGAAGAAAATACTAATTCTAATATCCTTCCTACAAGTGTTGATAAAACTGAAGAATCGCCTTCAGCTCAAGCTCTAATAACGACACTGCAAAAGAATAGAACTCACCGGCAAGATATCCTACGGAAATGA	1059	0.3919	MIACFEDDHFNIKVDDGVRMKIAVSLVLKNHKMISYKIKENAIENLNKLYDNHHQAPSDDKSEQPFETKSVLPAEAMSAADSADKAEPPLEDKSENQEAVPEAYAWHFSSLADLPADWVKINVQKTKDCFEVYALVPGLLREEGRTRLGESIMAVKDAMNVGLSTVSDPHKAEVMPDILPENKIYADENVRDCVFTSELGTSLKGKDEIKTYVEEVEIIVPSDTGIGENEDDSAISVRDAVNLDPQVAGGAVNLKEKDSAEFPSVLGQDDSPLGSNSVVITNASIRDIQLESAHVQFSNSCDAQTLLEKEEENTNSNILPTSVDKTEESPSAQALITTLQKNRTHRQDILRK	352

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g00143	352	MobiDBLite	consensus disorder prediction	309	331	-	-
	Adu03g00143	352	MobiDBLite	consensus disorder prediction	77	98	-	-
	Adu03g00143	352	PANTHER	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT	113	145	IPR045147	GO:0006357
	Adu03g00143	352	PANTHER	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5	113	145	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g00143	Adu-Chr3	1369419	1371396	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g00143	115	147	ARID Transcription Factor Family	AT1G76510	78.788	9.66e-12	63.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g00143	-		-	adu:110278915	390.578