Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00122 ATGAAGTTTTCTTCTAATAATACCCCACCCCCTCATAAGGTTAGCATCAATAATAATAATAATATTAATAATAAAGATCGTCACAGAAAGGTTAATGGAAGAGAAAGTCGCATTCTGTTGCCACCGTTATGTGCTGCGCGCGTGTTCCAGCTCACGCGCGAGCTAGGGCACAAGACTCATGGTGACACAATTGAGTGGCTCTTGCGCCACGCCGAACCTTCCATAGCCGCTGCAACTGGCGGCAAAAGTATAGTGCCACCACCACCATCATCATCGACCACCAATGATAATCAAGGTGTGAAAAATGGTGGTGGTGACACTGGGTGGTTGGAGTATGATGTTCTTGCAAACCTTGGTGTAGGGTTTTCTGCCAATGAAATTGCAGTGATCCAAGCAATGATCAAGAGCTTCAGCTGA 417 0.458 MKFSSNNTPPPHKVSINNNNNINNKDRHRKVNGRESRILLPPLCAARVFQLTRELGHKTHGDTIEWLLRHAEPSIAAATGGKSIVPPPPSSSTTNDNQGVKNGGGDTGWLEYDVLANLGVGFSANEIAVIQAMIKSFS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00122 138 ProSiteProfiles TCP domain profile. 24 78 IPR017887 -
Adu03g00122 138 MobiDBLite consensus disorder prediction 79 104 - -
Adu03g00122 138 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 81 IPR005333 GO:0003700
Adu03g00122 138 MobiDBLite consensus disorder prediction 1 22 - -
Adu03g00122 138 Pfam TCP family transcription factor 24 92 IPR017887 -
Adu03g00122 138 MobiDBLite consensus disorder prediction 85 102 - -
Adu03g00122 138 MobiDBLite consensus disorder prediction 1 34 - -
Adu03g00122 138 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 23 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00122 Adu-Chr3 1137398 1137814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00122 24 130 TCP Transcription Factor Family AT5G41030 45.528 8.35e-26 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu03g00122 TCP 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00122 - - ahf:112736155 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01367 08 23175939 23176502 Adu03g00122 03 1137398 1137814 PCT