Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00116 ATGGAAGAAATACAGTCTCAATCGGATGCATATCGGTCTTCTTCATCATCGGCAAGTAGCCCGGCCAGTAGGGTGCCATCAAGTCACTTCTTCTACCTTAGAAAACCGGGTTCTCTTCGACAACCAATCTCATTTGAGGACTCGCCTGAATGGGAAGACACTGATGTTGAAGCTAGAGGTGATGAAGGAGGAGGAGACACTATCAATGTTGCAACCCCGGCTTCACCTTCGCTTTCTAAGCTCAACAGTGGTTCCTTGGCATCTCCATATGGTTCATATATATTGGAGGGTGCAGTTCTTCCTCATAAGATTGTTGGCGCTTCTGTTGTGTGGAGAGATTTGACTGTTACCATAAAGGGAAAAAGGAAGTACTCTGATAATGTTATTAAGAGTTCAACCGGTTATGCCTTACCTGGTACAATGACTGTGATTATGGGACCTGCTAAATCAGGGAAATCGACGTTGTTACGCGCCATTGCAGGAAGATTGCATCCTTCAACCAGGACTTATGGTGAAGTGTTTGTGAATGGGGCGAAATCACACTTGTCCTATGGATCATATGGTTTTGTGGAGAGAAAAACCAATCTGATTGGATCACTCACTGTGAGAGAGTTTCTGTACTATTCAGCTCTGCTTCAACTCCCAGGATTCTTATTTCAGAAAAAGAATGTGGTAGAGGAAGCTATCCAAGCAATGTCTTTAGTTGACTATGCAAATACACTTATTGGTGGACATTGTTATTCAAAGGGCCTCTCCGGGGGCGAGAGAAGACGTGTTAGCATTGCGAGGGAGCTTGTGATGAAACCACAAATCCTGTTTATAGATGAACCTCTTTATTGTCTGGACAGTGTCTCAGCACTTTTGATGATGGTTACATTGAAGAAACTTGCAAGCAGTGGCTGCACTCTTATTTTTACTATTTACCAGAGCAGCACAGAAGTCTTTGGCCTTTTTGATCGAATATGCCTTCTTTCGAATGGAAATACTTTGTTCTTTGGAGAAACATTAGCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCCTGCCCTATCATGCAAAGTCCTTCCGATCACTTTCTTCGAGCAATCAATACAGATTTTGACAGGATAATTGCGATGTGTAAAAACTGGCAGGATGATAATGGAGACTTTTCTTCGGTCAACATGGACACAGCAGTGGCTATTTGCACACTTGAAGCAACATATAAATCATCAGCAGATGCAGCTGCTGTTGAAAATATGGTTATGAAACTCACAGAGAAGGAAGGTCCATCTCTGAAATACAAAGGCAAAGCTAGTGCTGCTACTCGCATAGCAGTCTTGACATGGAGGTCTTTATTGGTTATGTCAAGGGAGTGGAAATATTACTGGATCCGTCTGGTTCTCTGTATGCTTCTTACACTTTGCATTGGTACTATATTTTCCGGCTTGGGGCACTCGCTTTCTTCAGTTGGGACTAGAGTTACAGCAATTTTTGTATTTGTATCATTCTATTCGCTTCTAAGTATTGCTGGCGTGCCTGGACTTATTAAAGAAATCAAGATGTATGAATGTGAAGAATCTAACCAGCATTCAAGTGCACTAGTATTTTTACTTGGACAATTCTTGTCCAGCATGCCATTCCTTTTCCTCATCTCCATTTCATCAAGTCTAGTTTTCTACTTCCTAGTAGGGCTGAGAGATGAATTCAACTTCTTAATGTACTTTGTGCTCAACATTTTCATGTCTCTTTTAGCAAGTGAAGCACTTATGCTACTTGTTGCTACTTTATGGCAAGATATCTTCTGGAGTTTCTTAACAACTTTGTGCATTCAGGTAGTGATGATGCTTTCCGCCGGCTATCTTAGAATCCGAAATGATTTGCCTGGACCAGTGTGGATATATCCAATGTCATATATATCCTTTCATACATACTCTATTCAGGGTCTATTGGAGAATGAGTACCTAGGAAGCACCTTTTCAATTGGGGAGGTGAGGACCATATCAGGATTTCAAGCTCTCCAAAACATCTATGACATCTCTTCTGACACCAATTCAAAGTGGTCAAATTTGCTGGTTTTGTTTCTCATGGCAGTTGTTTATCGTTTTCTTGTGTTCATTTTATTATGCAGAAAATCATCTCTGCTTATTAGTTGTAGGTGTCAAAGAGTAGGTACAGACTTTACTAGTTGA 2172 0.4116 MEEIQSQSDAYRSSSSSASSPASRVPSSHFFYLRKPGSLRQPISFEDSPEWEDTDVEARGDEGGGDTINVATPASPSLSKLNSGSLASPYGSYILEGAVLPHKIVGASVVWRDLTVTIKGKRKYSDNVIKSSTGYALPGTMTVIMGPAKSGKSTLLRAIAGRLHPSTRTYGEVFVNGAKSHLSYGSYGFVERKTNLIGSLTVREFLYYSALLQLPGFLFQKKNVVEEAIQAMSLVDYANTLIGGHCYSKGLSGGERRRVSIARELVMKPQILFIDEPLYCLDSVSALLMMVTLKKLASSGCTLIFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSSVNMDTAVAICTLEATYKSSADAAAVENMVMKLTEKEGPSLKYKGKASAATRIAVLTWRSLLVMSREWKYYWIRLVLCMLLTLCIGTIFSGLGHSLSSVGTRVTAIFVFVSFYSLLSIAGVPGLIKEIKMYECEESNQHSSALVFLLGQFLSSMPFLFLISISSSLVFYFLVGLRDEFNFLMYFVLNIFMSLLASEALMLLVATLWQDIFWSFLTTLCIQVVMMLSAGYLRIRNDLPGPVWIYPMSYISFHTYSIQGLLENEYLGSTFSIGEVRTISGFQALQNIYDISSDTNSKWSNLLVLFLMAVVYRFLVFILLCRKSSLLISCRCQRVGTDFTS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00116 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 345 IPR027417 -
Adu03g00116 723 MobiDBLite consensus disorder prediction 1 26 - -
Adu03g00116 723 PANTHER ABC TRANSPORTER G FAMILY MEMBER 3 16 705 - -
Adu03g00116 723 Pfam ABC-2 type transporter 438 648 IPR013525 GO:0016020|GO:0140359
Adu03g00116 723 Gene3D - 102 346 IPR027417 -
Adu03g00116 723 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 16 705 - -
Adu03g00116 723 ProSitePatterns ABC transporters family signature. 251 265 IPR017871 GO:0005524
Adu03g00116 723 Pfam ABC transporter 138 278 IPR003439 GO:0005524
Adu03g00116 723 SMART AAA_5 138 328 IPR003593 -
Adu03g00116 723 MobiDBLite consensus disorder prediction 40 76 - -
Adu03g00116 723 CDD ABCG_EPDR 106 333 - -
Adu03g00116 723 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 109 351 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00116 Adu-Chr3 1067930 1072359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00116 136 312 Calmodulin-binding Proteins AT2G36910 26.203 1.93e-06 49.7