Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00110 ATGGCTGAGGTGACAGCAAGAAATAGAAGTAGCAGCAGCAACAAAAAAAAGGGTTTAAGTGGTGGCATGTTGAAGTTCAAGATTCTGTTGGAAAAGCTTCATAAAGTTGTGTTATTACTAGTAGGTAAAAATAATAAACCAAGCTCATCATATGTGAAAGAAGGCCATTTCGCTGTGATTGCTACTGTTGAAGGACCAAAGAGGTTCTTGGTGCCATTGAGGTGTTTGAGAAACCCTACATTCTTGAGTTTGTTGGAGAGAGCAGCTGAAGAGTATGGTTTTGATCAGCTTGGTGCAATTACCATTCCTTGCAACCCTAGTGACATTGAGACCTTACTGGCTCATCATCAAGTGGAGAAAGAGGAAGATGAAAAGTAA 378 0.4021 MAEVTARNRSSSSNKKKGLSGGMLKFKILLEKLHKVVLLLVGKNNKPSSSYVKEGHFAVIATVEGPKRFLVPLRCLRNPTFLSLLERAAEEYGFDQLGAITIPCNPSDIETLLAHHQVEKEEDEK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00110 125 Pfam Auxin responsive protein 43 114 IPR003676 GO:0009733
Adu03g00110 125 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 46 121 - -
Adu03g00110 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 46 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00110 Adu-Chr3 1011800 1012177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00110 21 114 Calmodulin-binding Proteins AT4G34750 34.043 1.79e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00110 - K14488 csv:101212725 103.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00110 03 1011800 1012177 Adu03g00110 03 1011800 1012177 ECH
Adu08g01373 08 23288761 23289481 Adu03g00110 03 1011800 1012177 PCT