Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00106 ATGCAGCGATCCGGTTACGGCGCCGACGGAATATATAGGTCCTTGAGACCTTCCTTTTCCCTTCCCAAAACCACCACCTCCCTCACCTCCTTCCTCTTCCAAAACACCACCGCCACCTCTTCCTCCGCTTCCAAAACCGCCCTCATCGACGCCGACACCTCCGAAACACTCACCTTCCGCCAACTCAAAACCACCGTCGCCAAGCTCTCCCACGCCCTCCTCCGCCTCGGCCTCAAAAAACACGACGTCCTCCTCATCCTCGCCCCAAACTCCATCCACTTCCCTATCTTGTTCCTCGCCGCCACCGCCATCGGCGCCGTCGTGACCACCGCGAACCCTCTTTACACCGTGACGGAGCTCTCCAAACAAATCAACAACTCCAACCCGAAGCTCGTGGTCACAGTTGCAGAATTATACGAGAAAGTCAGATCCTTCAAGTTCGAATTGCCCGCAGTGTTAATCGGTTCCGAAACGACACCAGAAACAATCAATTATAGTCGTTTAATGGAAGAAGTGGCAGGGGAGAATGAGTTACCAGTAAACGACGTGAATGAAGACGATACGGCAGCGCTTTTGTATTCTTCGGGAACGATGGGAGTGAGCAAGGGCGTGATTCTGACGCACGGGAATTTCATAGCGGCTGCGTTGATGATTGGAATGGACGACGATTACGTGGACGAACTTGAGGGAGTAAACGACAGCGTGTACCTCTGCGTTTTACCGATGTTCCACGTATTCGGGTTGGCAGTTATCCTGTACGCGCAGCTTAGAAGAGGGAGCACGGTGGTGTCCATGAGGAGATTCGAGTTGGAGAAGTTTCTAGAAGGCATTGAGAAGCACAAGGTGACGAACCTTTGGGTTGTGCCTCCGATCCTGCTTGCAATGGTCAAGCACAGCGTTGTGGATAAGTATGACGTGTCATCGTTGAGAAGGATTGGTTCCGGTGCGGCTCCTCTTGGCAAGGAATTGATGCGAGATTGTTCCAACCGTTTTCCTCATGCTGCTCTCATTCAGGGGTATGGAATGACAGAAACTTGTGGCATTATTTCTGTGGAGAATCCAAGAGCAGGGGTTCGTCATAGTGGTTCAACTGGAATGCTAGTGTCTGGAGTGGAAGCTCAAATCATGAGTGTTGATACGAACAAGCCCCTTCCCCCTAAACAATTGGGTGAGATTTGGGTACGGGGTCCAAATATGATGAAAGGTTATTTTAAGAATCCAGAGGCTACAAGATCAACTATAGATAGCAAAGGGTGGGTACATACCGGAGATCTTGGATATTTTGATGAGGAGGGTCAACTTTATGTTGTTGACCGTCTCAAAGAACTCATCAAGTATAAAGGTCTTCAGGTTGCACCAGCAGAACTTGAAGGACTTCTCGTTTCTCACCCTCAAATATTAGATGCTGTTGTCATCCCATATCCGGATGATGAAGCTGGTGAGGTTCCAATTGCCTTTGTTGTTCGTTCACCCAACACTTCACTCACTGAACAAGATGTTCAGAAGTTTATTGCTAATCAGGTTGCACCATTCAAAAGATTGCGAAGGGTGACATTCATCAACGGTGTTCCTAAGACAGCTTCAGGAAAAATACTCAGAAGAGACCTCATAGCAAAAGTACGATCCAAAATATAG 1635 0.4881 MQRSGYGADGIYRSLRPSFSLPKTTTSLTSFLFQNTTATSSSASKTALIDADTSETLTFRQLKTTVAKLSHALLRLGLKKHDVLLILAPNSIHFPILFLAATAIGAVVTTANPLYTVTELSKQINNSNPKLVVTVAELYEKVRSFKFELPAVLIGSETTPETINYSRLMEEVAGENELPVNDVNEDDTAALLYSSGTMGVSKGVILTHGNFIAAALMIGMDDDYVDELEGVNDSVYLCVLPMFHVFGLAVILYAQLRRGSTVVSMRRFELEKFLEGIEKHKVTNLWVVPPILLAMVKHSVVDKYDVSSLRRIGSGAAPLGKELMRDCSNRFPHAALIQGYGMTETCGIISVENPRAGVRHSGSTGMLVSGVEAQIMSVDTNKPLPPKQLGEIWVRGPNMMKGYFKNPEATRSTIDSKGWVHTGDLGYFDEEGQLYVVDRLKELIKYKGLQVAPAELEGLLVSHPQILDAVVIPYPDDEAGEVPIAFVVRSPNTSLTEQDVQKFIANQVAPFKRLRRVTFINGVPKTASGKILRRDLIAKVRSKI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00106 544 Pfam AMP-binding enzyme 42 446 IPR000873 -
Adu03g00106 544 Gene3D - 442 543 IPR045851 -
Adu03g00106 544 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 543 - -
Adu03g00106 544 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Adu03g00106 544 SUPERFAMILY Acetyl-CoA synthetase-like 42 541 - -
Adu03g00106 544 CDD 4CL 25 536 - -
Adu03g00106 544 Gene3D - 9 441 IPR042099 -
Adu03g00106 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00106 Adu-Chr3 991675 995029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00106 1 544 Monolignol Biosynthesis Gene Families AT4G05160 64.738 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00106 K01904 - gmx:100808944 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01375 08 23347752 23350899 Adu03g00106 03 991675 995029 PCT