Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00091 ATGGAAACCAAGGCTGAAGTTGTTTCTTCTTCTGCTGAATCCAGCTCCAAACACGTTTCTCCAATGGAACTTGGAATTGAGAATTTTGGGTGCAAACATTACAGAAGGAGATGCAAGATCAGAGCACCATGTTGTGATGAGGTTTTTGATTGTAGGCATTGCCACAACGATGCTAAGAACTCTGAGGAGATTAATGTTAAGGATCGTCATGATATCCCACGCCATGAAATTAACAAGGTCATTTGTTCTGTGTGTGATACAGAACAAGATGTTCAACAGAACTGCATAAACTGTGGGGTATGCATGGGCAAGTATTTTTGTGGTACTTGCAAATTCTTTGATGATGATGTTTCAAAGAACCAGTACCACTGTGATGATTGTGGCATCTGCAGAACTGGAGGAAAGGATAACTTTTTCCATTGCAAGAAATGTGGGTGCTGCTACTCTAAAATAATGGAAGCTGGTCATCGCTGTGTGGAAAGAGCAATGCATCACAATTGTCCTGTTTGCTTTGAGTATCTGTTTGAGACATTAAGGGATATTACTGTGTTGCCTTGTGGGCATACCATACATTTGGAGTGTGTCAAAGAGATGGAAAGACATCATAGGTACTCTTGTCCGGTTTGCTCCAAATCCATTTGTGACATGTCAAGTTTATGGAAGAAGCTTGATCAAGTGGTATGTGTATCACAATTTTTTCCTTAA 705 0.4028 METKAEVVSSSAESSSKHVSPMELGIENFGCKHYRRRCKIRAPCCDEVFDCRHCHNDAKNSEEINVKDRHDIPRHEINKVICSVCDTEQDVQQNCINCGVCMGKYFCGTCKFFDDDVSKNQYHCDDCGICRTGGKDNFFHCKKCGCCYSKIMEAGHRCVERAMHHNCPVCFEYLFETLRDITVLPCGHTIHLECVKEMERHHRYSCPVCSKSICDMSSLWKKLDQVVCVSQFFP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00091 234 SUPERFAMILY Zinc hairpin stack 103 160 IPR037275 -
Adu03g00091 234 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RZFP34 11 229 - -
Adu03g00091 234 SUPERFAMILY CHY zinc finger-like 28 102 IPR037274 GO:0008270
Adu03g00091 234 SMART ring_2 167 209 IPR001841 -
Adu03g00091 234 ProSiteProfiles Zinc finger RING-type profile. 167 210 IPR001841 -
Adu03g00091 234 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 11 229 - -
Adu03g00091 234 ProSiteProfiles Zinc finger CHY-type profile. 24 100 IPR008913 GO:0008270
Adu03g00091 234 Pfam Ring finger domain 166 209 IPR001841 -
Adu03g00091 234 Pfam CHY zinc finger 31 112 IPR008913 GO:0008270
Adu03g00091 234 ProSiteProfiles Zinc finger CTCHY-type profile. 102 166 IPR017921 -
Adu03g00091 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 221 IPR013083 -
Adu03g00091 234 SUPERFAMILY RING/U-box 165 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00091 Adu-Chr3 847059 849354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00091 29 232 C2H2 Transcription Factor Family AT3G18290 36.667 4.67e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00091 K10144 - gmx:100812709 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00091 03 847059 849354 Adu03g00091 03 847059 849354 ECH