Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00057 ATGGAGCAACAAAACCCTCAACAACCCTCTAACCCCATTTTGGACCACACTAGCTCTTTCAACAACAACACTATCGTGCCGAACGAAGCAAAGGTGGCGGCGGTGCCTGATTCTGGAGGGTCGGACTGGGTGTCAAGACCCGAAGCTGGAGGTTGGGAGCAGCATCATGGAGTGGTGGTTGTGAAGAGGGGGAGAGGGAGACCTCGAAAGTATGTCGACAAAGACGGCAGCGGGGGAGGGATGATGACGTCTCCGACGTCAGAGCCGCCGCCTTCGGGGTTTGCGGAAGCGGTAGCGTCCCCACTTGAGAGCCCTGCGGTAAAGAAGGGAAGAGGAAGGCCACGTGGTTCTGGAAAACTGCAGATTCTAGCCTCCATTGGTGGGTTTGTTGCAGAAACAGCTGGTGGAAGCTTCACACCTCATGTGATGATTGTTGGTACTGGAGAGGATGTGGTAAGTAGGATATTGTCATTTTTCCAAAAAGGCCCTCGTGCTGTTTGCATACTTTCAGCTACTGGTTCTGTGTCTAGTGTTGTAATTCGCCAACCTGGTGGTCTATTGAGATATGAGGTAACTATCAACAATAAAAAAGACATTGTTTTTCTTATTCTTTCCCAATTGATTTTGTGTTACATATATATACAGGGTAGGTTTGAGATTTTATCTTTATCTGGATCATGCACCTACACCAATGGCAATGGTAATGCATATCGCAAAGATGGCATGTTGAGTGTTTCTCTTGCTAAACCTGATGGCAGGGTTTTTGGTGGTGGCATTGAGAACTCTTTGATTGCTGCTGCCCCTATTCAACTTGTTTTGGCCACTTTCAAGCAAAATATCAGCAACCAAATCAAGAAGAGGTACTCATCTGACCCTTCTTCTAATGGTGTCCCCTATACTGCTCCTGCCGCCATCGCTGTCGTGCCGGATATTCCGGATTCCTCAAGGGGTAGCCACAAAGTTCTTAAGTTATCATTACATGAACAGAGTTTCCCTTCACCACCAGGAACAACAAATGCAATTCAAGATGGTGTCACAATTGTAACAACTAATGACATAGCAGATAATGTGATTCCTACAACAACAAATGTGGTGACAAATAATGTCATTGCTGAAGATCTCAACATGCATTCTTCCTCAATCGAGGATGCTATTGACCTTGACCAAACAGCCTCACCAGCAGATGTGGATACTAATTAA 1200 0.4608 MEQQNPQQPSNPILDHTSSFNNNTIVPNEAKVAAVPDSGGSDWVSRPEAGGWEQHHGVVVVKRGRGRPRKYVDKDGSGGGMMTSPTSEPPPSGFAEAVASPLESPAVKKGRGRPRGSGKLQILASIGGFVAETAGGSFTPHVMIVGTGEDVVSRILSFFQKGPRAVCILSATGSVSSVVIRQPGGLLRYEVTINNKKDIVFLILSQLILCYIYIQGRFEILSLSGSCTYTNGNGNAYRKDGMLSVSLAKPDGRVFGGGIENSLIAAAPIQLVLATFKQNISNQIKKRYSSDPSSNGVPYTAPAAIAVVPDIPDSSRGSHKVLKLSLHEQSFPSPPGTTNAIQDGVTIVTTNDIADNVIPTTTNVVTNNVIAEDLNMHSSSIEDAIDLDQTASPADVDTN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00057 399 Pfam Plants and Prokaryotes Conserved (PCC) domain 140 277 IPR005175 -
Adu03g00057 399 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 214 350 IPR039605 GO:0003680
Adu03g00057 399 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 280 - -
Adu03g00057 399 CDD DUF296 139 276 IPR005175 -
Adu03g00057 399 MobiDBLite consensus disorder prediction 1 28 - -
Adu03g00057 399 ProSiteProfiles PPC domain profile profile. 135 303 IPR005175 -
Adu03g00057 399 SMART AT_hook_2 62 74 IPR017956 GO:0003677
Adu03g00057 399 SMART AT_hook_2 108 120 IPR017956 GO:0003677
Adu03g00057 399 MobiDBLite consensus disorder prediction 1 50 - -
Adu03g00057 399 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 25 190 IPR039605 GO:0003680
Adu03g00057 399 PANTHER DUF296 DOMAIN PROTEIN 25 190 - -
Adu03g00057 399 PANTHER DUF296 DOMAIN PROTEIN 214 350 - -
Adu03g00057 399 Gene3D - 140 291 - -
Adu03g00057 399 MobiDBLite consensus disorder prediction 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00057 Adu-Chr3 508820 531248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00057 60 322 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 36.996 3.82e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00057 - - aip:107632385 660.603