Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00054 atggagttCTGGGGTGTTGAGGTTAAGCCAGGGGATTGCGTTAAAATAGAGGAGTTGGAAGTAGCTAATGCCTACATCCACATCTCTCAGGTTGCGCTGGGAGAGGCCTCAAAGAATGAGAAATCTAAGGAACCTGTGGTTGTCTACCTCAAAGTTGGAGTGCAAAAGCTTGTTTTGGGAACTTTGAACAGGGAGGAAATCCCCCAAATACCCTTGGATTTGGTTCTCGACCAAGGGGCTGAGCTTTCCCACACTTGCAAGAGTGCCAGTGTCTATTTCTGTGGATATAGGGCTGATCGTGATGAGGACGTACCTGGTGATCTTGGTTCTGATGACTATTCAGAGAGTGATGAGGAAGAGGCTGCATTGAATCTCAAAGATAATGGAAAAGTTGAAACCAAGTCTGAAAAGGTAAAGATTGCTGAACCAAAAAAGGATGTGAGTGGTGCCCCAGCAAAGAAAGTCAATGTTGCTGTTCCAAAGAAAGATGAAGAGGACGAGGACTCTGATGATGACGACGACGACGATGATGATGAGTCTGATGATGAGGATGAATCTGGAAGTGAGATGGATGCTGATAGTGATGAGGACGGGAGTGATGAAGATGAAGAGACACCTGTGAAGAAGGTCGACCAGGGCAAGAAGAGACCAAATGTGTCTGCAACAAAAACTCCAGTTCCTGCTGCTAAGAAAGCTAAGAATGTAACTCCTGAAAAGTCTGGTGGCAAGAAAATTGCACATGCACCAACCCCTCACCCCGTGAAGAAAGGTGGAAATCCAAACAGTGCAGGGAAGTTCCAGTCACCTAAAACTGGTTCACAGCAGCAGAAAAAGGGTGGAAAGAAGGGTGGTCGTTGA 858 0.4592 MEFWGVEVKPGDCVKIEELEVANAYIHISQVALGEASKNEKSKEPVVVYLKVGVQKLVLGTLNREEIPQIPLDLVLDQGAELSHTCKSASVYFCGYRADRDEDVPGDLGSDDYSESDEEEAALNLKDNGKVETKSEKVKIAEPKKDVSGAPAKKVNVAVPKKDEEDEDSDDDDDDDDDESDDEDESGSEMDADSDEDGSDEDEETPVKKVDQGKKRPNVSATKTPVPAAKKAKNVTPEKSGGKKIAHAPTPHPVKKGGNPNSAGKFQSPKTGSQQQKKGGKKGGR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00054 285 MobiDBLite consensus disorder prediction 119 149 - -
Adu03g00054 285 MobiDBLite consensus disorder prediction 164 202 - -
Adu03g00054 285 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 279 - -
Adu03g00054 285 MobiDBLite consensus disorder prediction 261 278 - -
Adu03g00054 285 Pfam Nucleoplasmin-like domain 3 96 IPR041232 -
Adu03g00054 285 MobiDBLite consensus disorder prediction 103 285 - -
Adu03g00054 285 Gene3D Nucleoplasmin core domain 1 104 - -
Adu03g00054 285 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00054 Adu-Chr3 482725 485011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00054 1 276 C2H2 Transcription Factor Family AT5G03740 34.932 2.85e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00054 - - gmx:547649 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01424 08 23957616 23960327 Adu03g00054 03 482725 485011 PCT