Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00019 ATGGCGGAAGAACACAGGTGCCAAGCTCCACGCCTCTGCGTAAATAATTGTGGATTCTTTGGAAGCCCGACCACAAACGGCCTCTGCTCCAAGTGCTATCGCAATCTCCAGCTTAAGGAGCAGCAGTCTTCCTCTGCCAAATTGGTCCTCAACCAAACCCTGCAGGTTCCTCCGGCAGCAGAACCTATTTCTACTCCTTCAGCATCAACATCATCATCTTGTACGGAGGAGGTTGATCGTCCTTGCAGCGCAGCAGTGATGGAGGAGAAGGTGGCAGCGAATCGGTGTGCAAGATGCAGGAGGCGTGTGGGGCTTACGGGGTTCAAGTGCAGGTGTGGGTTGACGTTGTGTGGGTCCCATCGGCACCCAGAACAACACTCATGCCACTTCGATTTCAAGGGATTCGGGAGGGAGCAAATCGCAAAGGCAAACCCTCTAATCAAGGCCGACAAGCTTAATAAGATTTGA 468 0.5278 MAEEHRCQAPRLCVNNCGFFGSPTTNGLCSKCYRNLQLKEQQSSSAKLVLNQTLQVPPAAEPISTPSASTSSSCTEEVDRPCSAAVMEEKVAANRCARCRRRVGLTGFKCRCGLTLCGSHRHPEQHSCHFDFKGFGREQIAKANPLIKADKLNKI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00019 155 Gene3D - 72 151 IPR035896 -
Adu03g00019 155 ProSiteProfiles Zinc finger AN1-type profile. 90 136 IPR000058 GO:0008270
Adu03g00019 155 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Adu03g00019 155 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 155 - -
Adu03g00019 155 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 155 - -
Adu03g00019 155 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Adu03g00019 155 SUPERFAMILY AN1-like Zinc finger 84 150 IPR035896 -
Adu03g00019 155 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 54 - -
Adu03g00019 155 Pfam AN1-like Zinc finger 96 132 IPR000058 GO:0008270
Adu03g00019 155 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Adu03g00019 155 Gene3D - 1 71 - -
Adu03g00019 155 SMART AN1_Zf_4 96 133 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00019 Adu-Chr3 218555 219377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00019 1 155 C2H2 Transcription Factor Family AT3G52800 46.524 6.37e-41 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00019 - - mesc:110625469 207.223