Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00008 ATGTCTTCCAACAACAAACAAGCTCTTTTCAAAACTGTATTCACAATAAACGGTAGCTGTGGCTGCGGCAAAACAAAGGCCTTAGAGGTACACGAACCAACCCCAAAACCCAAAATCTCCATTCACCAGAACAACACAAATACAACAATTAACAACCCTAGCAGCATGGCTTCTTCATTCACCACTACTTCGCACAACGGTGCCTTCTCCGGCGCTGAGGACGAAGATTCCTCCACCACAATCTCTGAATCCGAAACCACCCATGAGCATATCAGCAATAACCTTATTATCCCCAAACGAAGCCCACTCATGGATACACTTGCAGTTGAGAAGGACTCTTCGGACCCATATCATGATTTCCGGCATTCCATGCTCCAAATGATCTTCGAGAAAGAGATTGAATCTAAGGATGATCTTCAGGATCTTCTTCAGTGTTTTCTTCAGCTGAATGCACCTCATTACCATCATATCATCGTTAAGGCCTTCAATCAGATATGTGAAGAGGCCTTCCCTGAGAAGGTTTGTACTACTACCCCTTCTATTGACAGAAGATCTTCCTCTTGTAGGAACACCTTCATCGTTCACAAGACTTGCCGCTGA 600 0.4433 MSSNNKQALFKTVFTINGSCGCGKTKALEVHEPTPKPKISIHQNNTNTTINNPSSMASSFTTTSHNGAFSGAEDEDSSTTISESETTHEHISNNLIIPKRSPLMDTLAVEKDSSDPYHDFRHSMLQMIFEKEIESKDDLQDLLQCFLQLNAPHYHHIIVKAFNQICEEAFPEKVCTTTPSIDRRSSSCRNTFIVHKTCR 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00008 199 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Adu03g00008 199 MobiDBLite consensus disorder prediction 59 77 - -
Adu03g00008 199 MobiDBLite consensus disorder prediction 59 95 - -
Adu03g00008 199 Pfam Transcriptional repressor, ovate 113 168 IPR006458 -
Adu03g00008 199 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 108 166 IPR006458 -
Adu03g00008 199 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 176 IPR038933 GO:0045892
Adu03g00008 199 ProSiteProfiles OVATE domain profile. 109 168 IPR006458 -
Adu03g00008 199 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 4 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00008 Adu-Chr3 100754 101353 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Adu03g00008 Ovate 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00008 - - gmx:102660065 217.238