Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00002 ATGACTGATGCTTCATTTGAGAGTGAGACGGAGTATTACACCCCAAACCATCACAAACGATACTATCCAACGCCAGTAAGCCATCACAACGTCTTTGGCTCGGAGTCTTTCACAATGTCCACCTCTCAAACTCAACGCAAAGCCGCCAGCTCTAGAAGAGCTCGCCCCAACAGAATTCCCACGACGCCTTTCGCTTCGGACGATGATCATTCGTGGCAAGGAGAGGTTTCTTGGAAGTTCGAGGCCAGCAGGGGATGGCAAGAGTACAGCGCACGCATGGGCTCTGTTCTGAATCCATGGCCAGTCGACTCCCCATTTGAACACAGCCGCGTGTTTCGTCAGTCGGCCAATGACTACTTCCTTTCACAAACTAGTCGATTCAAAGGCCACTCAGGCTCAACTTATCATAATGAGCATTCCGTCTACGGAAGAGTTGAGCTCCAGAGCTATGTTGCCGGGGACAGTGACCTTAGCGAGTCTCGTGGTTTCTCTAAAACGAAGGTCATAAAAGAAAGAGATAGCATAATAAGAAACAAGACTAGTCCGTTGGCCGAAGAAGACGAGCTCAGTTGGATAGACTATAGCATCTCTGATAAAGAAATCGGTGGGTATCACGCTAAATTCTCTTATATTAAACATGACCACCGTGGCAAGCATGGCGATAGTTACGGACTACCATCAGCCGGAGATAAATTCGGTACCCCGAGTTATGGTGTTGACAAGGTTCCAGGGTATGAGTATGATGAAGAGGGCGAGGAGGAATTGGACGAGGAAGATGCAGGGCCTCCAAAGACAATTGGGTTGTTTCGGCTATTTAGGTATGCAACAAAGTGGGATTGGGTTCTTGTGCTTGTAGGTTGTTTAGGTGCTTTCATAGATGGAGGCTCACTTCCTTTTTATTCTTATCTTTTTGGAGAATTGGTCAATAAGATTTCACAAAATGGGAATAATAAGCAAATGATGAAGGATGTAGAGAAGATATGCATATATATGACCGGGTTGGCTGCAGTTGTTTCGGTTGGAGCATATTTGCAGATCGCATGTTGGAGGTTAGTGGGCGAGAGATCTGCTCAAAGAATGAGGACGGAGTATTTAAGAGCAGTTCTTCGACAGGATATTAGCTTTTTTGATACACAGATCAACACTGGTGACATTATGCATGGAATAGCAAGTGATGTTGCACAAATCCAAGAAGTTATGGGAGAGAAGATGGCTCACTTTGTTCATCATATATTTACATTTATATGTGGCTACATAGTTGGATTTAGAAGATCATGGAGAGTCTCTTTGGTGGTATTCTCAGTCACCCCATTAACAATGTTTTGTGGTATAGTCTACAAAGCAATTTATGGTGGTCTAACAGCAAAAGAAGAAGCTTCTTACAGGAAAGCTGGTGTTATTGCGGAACAAACGATCAGTTCAATTAGGACAGTGTTTTCTTTTGTTGCGGAAAGGCAATTGGCAGCAAAATATGCTCAATTACTACAAAAATCAGCCCCAATCGGCGCAAAAATTGGTTTTGCCAAGGGTGCAGGCATGGGCATTATCTATTTAGTAACATATTCGACATGGGCCTTGGCATTTTGGTATGGCTCCATCTTAATTGCCACGAACAAACTTGATGGGGGTGCAGCTATTGCTTGTTTCTTTGGTGTCAATGTAGGAGGAAGAGGTCTAGCATTGGCGCTGTCATATTTTGCACAATTTGCACAAGGTACAGTTGCAGCAAGTCGTGTATTCTCTATTATAGACAGAATTCCTGAGATTGATCCATATAGCCCTGACGGAAGGAAGCTTACTGTTGTCCGTGGTAGAATTGAGTTAAAAAATGTTAGTTTTGCATACCCATCTCGTCCTGATTCTCTGATACTTCATTCCCTTAATTTAGTATTTTCATCGACAAAAACTTTGGCACTCGTTGGTGCTAGGAAATTTATCATTGTGCTTTCTTTCAATATTATCCTTGTAGGGACGATAACCTTGGACGGGCATGATTTGAGGACGTTGCAAGTCAAGTGGCTAAGAGGTCAAATTGGGATGGTTGGTCAAGAGCCAATCCTCTTTGCAACCTCCATACTAGAAAACGTTATGATGGGGAAAGATAATGTCACTAAGGAGGAGGCAATTGCTGCTTGCATTGCTGCAGATGCTCACAATTTCATATCTAACTTACCACTTGGCTATGACACTCAGGTCGGAGATAGGGGCACAAAACTATCAGGTGGTCAAAAGCAGAGAATCGCACTGGCTCGAGCAATAATCAAAGATCCTAAAATCCTTCTTTTAGACGAACCTACCAGCGCTCTTGATGCTGAGTCAGAGTCTGCAGTGCAACGAGCCATCGACAAGATTTCTGTGGGTCGAACAACCATTGTCATTGCTCATAGGATAGCTACTGTAAAGAATGCTCATGCCATCGTGGTCCTCGAAAATGGTACTGCCATTGAGATGGGTAACCATCTCCAGCTTATAGGGAAAGGGGGAACCTACTATAACCTTGTCAAACTCGCCACCGAGGCCATATCAAGGCCTCTCTCTAATGAACATGACATGCAAAAATCCAATGATCTTTCCATCTATGACAACTCAATTGCTGATGTATCAAGATATGCAGCAGATATCTCGAGGCCTAAACATTTAAAATACGCTCAGGAGAAAAAAGTAGAGATCGAAGACGAGCCAAACAAAATGCCAACAAAATTTAGACTTTCTGAGATATTGAAATTGCAAAAGCCAGAGCTTTGGATGCTACTTTTAGGATTCTTTCTGGGTATGTTTGCAGGCGCTTTTCTGTCTCTTTTTCCTTTGGTTTTAGGCATATCTCTTGGGGTATATTTTGATGATGACACTGATAAGATGAAGAGAGATGTTGGACACCTTTGTTTAGCACTTGTTTGTCTTGGATTCGGTTGTATTCTTTCCATGACAGGACAACAAGGATTTTGTGGTTGGGCAGGATCAAAGCTTACACTAAGGGTTAGAAACCTCTTGTTCCAGTCCATCTTGAAACAAGAACCTGGGTGGTTTGATTTTGATAAAAACTCGACTGGAGTGTTAGTGTCAAGGCTCTCCATTGATTGTATCAGCTTTCGTTCAATACTTGGTGATCGATTCTCAGTCCTTCTTATGGGGATGAGTTCAGCAGCTGTCGGTCTTGGTGTTTCCTTTGTCATCAATTGGAAACTAACCCTTTTGGCGGCTGCTGTTACTCCCTTTACTCTTGGTGCAAGTTATGTAAGCTTGCTTATAAATATTGGGCCACATGTTGATAACAATGCATATGCCAAAGCTAGCAATATTGCTTCTGGTGCAGTATCAAACATAAGAACGGTTACCACTTTTTCTGCCCAGGAAATATTAATTAAGTCCTTTGATCAAGCCTTATCAGAACCTCAAAGGAAATCATTGAAAAGTTCGCACATTCAAGGTCTAACATTTGGGTTCTTTCAAGGAGCCATGTATGGAGCGTACACCTTGGTTCTTTGGTTTGGTGCCAGACTTGTAGATCGTAGCGAAGCGAAGTTCGGAGATGTTTTTAAGATCTTTCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAACACCGGATACTTCTATGGCGGCCACAGCAATCCCTTCTGTTCAAGATATCATAAACCGGAGGCCGCTGATAGGCAACGATAAGTCAATAAGAAGCAAGAAAGTAGAAGATCGATTAAAGTCGCCTTTCAAAATAGAATTCAAAATGGTCACATTTGCATACCCATCTAGGCCTGCAGTTACAGTGCTAAGGGATTTCTCTTTGAAGGTCAAAGGTGGAAGCACCGTGGCCTTGGTAGGACCCAGTGGATCAGGAAAATCAACCATCATATGGTTGATACAGAGGTTCTATGATCCAAATAAAGGAAAAGTGATGCTAAGTGGGGTAGACCTTATGGAAATTGATGTTAAGTGGTTAAGGAGGCAAATGGCTTTAGTAGGTCAAGAACCAGCACTGTTTTCTGGGAGTATAAGGGAGAACATTACCTTTGGGGACCCAAATGCGTCATGGGCTGAAATTGAAGCAGCTGCAAAAGAAGCTTACATCCACAAATTCATTAGTGGCCTTCCTCAAGGTTATGAGACCCAGGTTGGTCAAAGCGGGGTCCAACTATCAGGTGGCCAAAAACAAAGAATTGCAATAGCAAGGGCTATACTGAAGAAATCAAGGGTGATTCTACTTGATGAAGCAAGCAGTGCTTTGGACTTGGAGTCAGAGAAACACATCCAAGATGCCCTTAAGAAAGTTTCCAATGAAGCAACAACCATCATTGTAGCCCATCGTCTATCGACAATTAGAGAAGCTGACAAGATAGTGGTTATGAAAGATGGGGGAGTAGCAGAGTATGGAAGTCATGACACACTGATGACTTCCCATCAAAATGGTCTGTATGCTAGCCTAGTTCGTTCTGAGACCGAAGCCAATGCCTTTGCTTGA 4470 0.4295 MTDASFESETEYYTPNHHKRYYPTPVSHHNVFGSESFTMSTSQTQRKAASSRRARPNRIPTTPFASDDDHSWQGEVSWKFEASRGWQEYSARMGSVLNPWPVDSPFEHSRVFRQSANDYFLSQTSRFKGHSGSTYHNEHSVYGRVELQSYVAGDSDLSESRGFSKTKVIKERDSIIRNKTSPLAEEDELSWIDYSISDKEIGGYHAKFSYIKHDHRGKHGDSYGLPSAGDKFGTPSYGVDKVPGYEYDEEGEEELDEEDAGPPKTIGLFRLFRYATKWDWVLVLVGCLGAFIDGGSLPFYSYLFGELVNKISQNGNNKQMMKDVEKICIYMTGLAAVVSVGAYLQIACWRLVGERSAQRMRTEYLRAVLRQDISFFDTQINTGDIMHGIASDVAQIQEVMGEKMAHFVHHIFTFICGYIVGFRRSWRVSLVVFSVTPLTMFCGIVYKAIYGGLTAKEEASYRKAGVIAEQTISSIRTVFSFVAERQLAAKYAQLLQKSAPIGAKIGFAKGAGMGIIYLVTYSTWALAFWYGSILIATNKLDGGAAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFSIIDRIPEIDPYSPDGRKLTVVRGRIELKNVSFAYPSRPDSLILHSLNLVFSSTKTLALVGARKFIIVLSFNIILVGTITLDGHDLRTLQVKWLRGQIGMVGQEPILFATSILENVMMGKDNVTKEEAIAACIAADAHNFISNLPLGYDTQVGDRGTKLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESAVQRAIDKISVGRTTIVIAHRIATVKNAHAIVVLENGTAIEMGNHLQLIGKGGTYYNLVKLATEAISRPLSNEHDMQKSNDLSIYDNSIADVSRYAADISRPKHLKYAQEKKVEIEDEPNKMPTKFRLSEILKLQKPELWMLLLGFFLGMFAGAFLSLFPLVLGISLGVYFDDDTDKMKRDVGHLCLALVCLGFGCILSMTGQQGFCGWAGSKLTLRVRNLLFQSILKQEPGWFDFDKNSTGVLVSRLSIDCISFRSILGDRFSVLLMGMSSAAVGLGVSFVINWKLTLLAAAVTPFTLGASYVSLLINIGPHVDNNAYAKASNIASGAVSNIRTVTTFSAQEILIKSFDQALSEPQRKSLKSSHIQGLTFGFFQGAMYGAYTLVLWFGARLVDRSEAKFGDVFKIFLILVLSSFSVGQLAGLTPDTSMAATAIPSVQDIINRRPLIGNDKSIRSKKVEDRLKSPFKIEFKMVTFAYPSRPAVTVLRDFSLKVKGGSTVALVGPSGSGKSTIIWLIQRFYDPNKGKVMLSGVDLMEIDVKWLRRQMALVGQEPALFSGSIRENITFGDPNASWAEIEAAAKEAYIHKFISGLPQGYETQVGQSGVQLSGGQKQRIAIARAILKKSRVILLDEASSALDLESEKHIQDALKKVSNEATTIIVAHRLSTIREADKIVVMKDGGVAEYGSHDTLMTSHQNGLYASLVRSETEANAFA 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00002 1489 MobiDBLite consensus disorder prediction 37 71 - -
Adu03g00002 1489 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 918 1204 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu03g00002 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1243 1479 IPR003439 GO:0005524
Adu03g00002 1489 SMART AAA_5 1270 1456 IPR003593 -
Adu03g00002 1489 SMART AAA_5 633 828 IPR003593 -
Adu03g00002 1489 CDD ABC_6TM_Pgp_ABCB1_D2_like 907 1222 - -
Adu03g00002 1489 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu03g00002 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1239 1480 IPR027417 -
Adu03g00002 1489 CDD ABC_6TM_Pgp_ABCB1_D1_like 284 579 - -
Adu03g00002 1489 Gene3D - 604 856 IPR027417 -
Adu03g00002 1489 PANTHER ABC TRANSPORTER B FAMILY 222 1488 - -
Adu03g00002 1489 CDD ABC_MTABC3_MDL1_MDL2 1243 1480 - -
Adu03g00002 1489 SUPERFAMILY ABC transporter transmembrane region 263 591 IPR036640 GO:0005524|GO:0016021
Adu03g00002 1489 ProSitePatterns ABC transporters family signature. 739 753 IPR017871 GO:0005524
Adu03g00002 1489 Gene3D ABC transporter type 1, transmembrane domain 240 320 IPR036640 GO:0005524|GO:0016021
Adu03g00002 1489 Gene3D - 1237 1488 IPR027417 -
Adu03g00002 1489 Gene3D ABC transporter type 1, transmembrane domain 328 1208 IPR036640 GO:0005524|GO:0016021
Adu03g00002 1489 Pfam ABC transporter transmembrane region 917 1188 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu03g00002 1489 Pfam ABC transporter transmembrane region 284 552 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu03g00002 1489 Pfam ABC transporter 657 767 IPR003439 GO:0005524
Adu03g00002 1489 Pfam ABC transporter 1261 1409 IPR003439 GO:0005524
Adu03g00002 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 836 IPR027417 -
Adu03g00002 1489 SUPERFAMILY ABC transporter transmembrane region 905 1220 IPR036640 GO:0005524|GO:0016021
Adu03g00002 1489 PANTHER - 222 1488 - -
Adu03g00002 1489 ProSitePatterns ABC transporters family signature. 1382 1396 IPR017871 GO:0005524
Adu03g00002 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 606 836 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00002 Adu-Chr3 35818 46254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00002 948 1489 Calmodulin-binding Proteins AT2G36910 36.765 1.10e-99 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00002 K05658 - gmx:100816700 2120.89