Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02848 ATGGAGACTGAAGCTCCTGAAGACAGAGAGGATAACAGAGCTGATGACGACACAATCGAAAAGGGTCCAGAATCATCTGAAATAACTGAGGAACTCTCAAATAGACGACATGGGACTAGGAAAAGCCTCATCTTGGAGATTCCAACAACAAGCACTGTGGATGAAGATTTTGTGAGGATAAACATGCCTCTAACTCCTCCTCCAAGAAAAGTGGCCTTTTCACCATGTCCAAGCCCTTCAGCATCAAGGAATAGATCAACTATGAAAACTTTATTTCCCAAACTCACTTTAAAAATCAGGAGCACAAGCTCACAGCAGATCGAAAATGCTGCTTTTCTTGCACTCGAAGGTTCACCAAAGGTGGCACCAAAGAAGCCTCTTCTTCCGAGGACATTTTCACTTACAAAGTTGATCACCCCTAGAGGGAAGAACACGGCATCCTTGCCTGTAACACCGATTGCTCACTCTAATCCAGGGTCCACACATGGAGGAAATGCTGCTTATCTAGCTTCAATTGATAAAGGGATCCAATTACCAATGCATCGTTCTCGTTCAGTTCCAATACTTAACAAGGCAGGGAGCACAAGTGTAGGTGGAATGTTTCGTATAATTCCAACCACACCAACATCAGCGACATCTCCATCTGGTGATAGTGTTGAGAATGAGGATGGTGGTGAAGATATTCCCGAAGAAGAAGCTGTTTGTAGAATTTGTATGGTTGAATTGGGGGAAGGTGCTGATGATACTCTTAAATTGGAGTGTAGTTGCAAAGGTGAACTTTCACTGGCTCACCAACAATGTGCAGTTAAATGGTTTAGCATTAAAGGAAACAGAACATGTGATGTTTGCAAGCAAGAAGTTAAGAACTTACCTGTGACTCTCTTGCGGCTTCAAACTGCACCTAGAGGGCAGCATGCTGAGATTTCTCAAACAAGGGTTTGGCAGGATGCTCCCATTCTTGTAGTTGTCAACATGCTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTTTCAAGTATGGGCTCTGGTGCTGTTGCCATGTCTCTTCCATTTTCTTGTATACTTGGTCTTCTTGGTAGCATGACATCTACAACAATGGTGAGGAGAAATCATGTTTGGGTTTATGCAACTGTGCAGTTTGTTCTGGTGGTTGTCAGTGGACACCTTTTCTATTCATTGGTTCATATGCAAGCTGTTCTAGCTATTTTGCTTGCCACATTTACTGGCTTTGGGGCTGTGATGTTTGTAGCTTCTGTTCTTGCTGAGATATCAAATTGGAGGAGAATAAGTCTTGGTCAGTTGAATCAAGAGGAGGCAGTGGCACCTGATCAATCTGAGGCTCCTGAAAGTAATTTGAGAGATTCCCCTCTTATGCATGTGAACCAGCTAAATGTGCTCCCACTCGGATAA 1410 0.4326 METEAPEDREDNRADDDTIEKGPESSEITEELSNRRHGTRKSLILEIPTTSTVDEDFVRINMPLTPPPRKVAFSPCPSPSASRNRSTMKTLFPKLTLKIRSTSSQQIENAAFLALEGSPKVAPKKPLLPRTFSLTKLITPRGKNTASLPVTPIAHSNPGSTHGGNAAYLASIDKGIQLPMHRSRSVPILNKAGSTSVGGMFRIIPTTPTSATSPSGDSVENEDGGEDIPEEEAVCRICMVELGEGADDTLKLECSCKGELSLAHQQCAVKWFSIKGNRTCDVCKQEVKNLPVTLLRLQTAPRGQHAEISQTRVWQDAPILVVVNMLAYFCFLEQLLVSSMGSGAVAMSLPFSCILGLLGSMTSTTMVRRNHVWVYATVQFVLVVVSGHLFYSLVHMQAVLAILLATFTGFGAVMFVASVLAEISNWRRISLGQLNQEEAVAPDQSEAPESNLRDSPLMHVNQLNVLPLG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02848 469 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 9 449 - -
Adu02g02848 469 SUPERFAMILY RING/U-box 231 287 - -
Adu02g02848 469 SMART ringv_2 234 284 IPR011016 GO:0008270
Adu02g02848 469 MobiDBLite consensus disorder prediction 1 37 - -
Adu02g02848 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 292 IPR013083 -
Adu02g02848 469 PANTHER OS02G0165000 PROTEIN 9 449 - -
Adu02g02848 469 ProSiteProfiles Zinc finger RING-CH-type profile. 227 290 IPR011016 GO:0008270
Adu02g02848 469 MobiDBLite consensus disorder prediction 207 226 - -
Adu02g02848 469 CDD RING_CH-C4HC3_MARCH 235 284 - -
Adu02g02848 469 Pfam RING-variant domain 235 283 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02848 Adu-Chr2 94122808 94125801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02848 232 290 C3H Transcription Factor Family AT2G37950 42.373 1.27e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02848 - - gmx:100787963 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02848 02 94122808 94125801 Adu02g02848 02 94122808 94125801 ECH