Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02846 ATGGGTAACATAGGAAGTAGTAGTGCCAGCAACCGCAGAAGACACGGTGGTGGCGGTGGCGGAAGTGGACGGAGGATCCATCCTCCACCTCCTCCTCCGCCGCCGGTGACGCCACAGCCGGAAATCACAGCCAATCGGTTCGTGTACCCTGCTGCTGCGACTCCATATCATAACTATCCCGGTTATTATCCGCCGCCGGTGCCTTTGCCGGCACCCTATGACCACCACCACCGGCCCGCGGCGGTGGAGCCGATGTGGGGGCGGTATCCTCCGCCGGCAGCGCCTATGCCTCCGACGCCGTATGTGGAGCACCAGAAGGCGGTTACTATAAAAAATGATGTGAACATCAAGAAGGAAACTTTGAGGATTGAAGCTGATGAAGAGAACCCTGGGAAGTTCCTTGTTTCATTCACATTTGACGCCACCGTTTCTGGGAGCATTACTATACTTTTCTTTGCAAAAGAAGGTGAAGGCTGCATCCTTACTCCAATGAAGGAAGATTCTCTTCCACCTGTGACTGTACATTTCCAGCAAGGTCTTGGCCAGAAGTTTAGGCAGCCAGCTGGAACTGGTATTGATTTTTTGCAATTTGAGGAGTCCGAGTTATTGAAAGTGGGAGAGATGGATATCTATCCTCTAGTAGTTAAGGCAGATGCAATGTTGGGCGATCATGACGGATCAAATGAGACTCCAAAGCATGGATCAAATGAAACTCGAAATGAAGGATCTAATGAAACTCCAAATGACGGACCTAATGAAACTCCAGTAACAGGTATTACAAACTCGCAGATAACAAAAGCAGTGTTTGAGAAGGAGAAAGGGGAATTCCAGGTGAAGGTTGTCAAGCAGATCTTGTGGGTGAATGGATTGAGGTATGAGCTGCAGGAGATATATGGCATTGGAAATTCAGTGGAGAGTGAAGTGGATGGAAATGACCCAGGAAAAGAATGTGTTATTTGTCTGTCAGAGCCCAGGGATACGACTGTCCTTCCTTGCCGTCACATGGTATTCACTGTCTCCCCTTTTTGGATTAATTTTTCTCTTGATCATTTCATTACTAGAATGATGCCAGTGGTAGTCATGGATATCATTCCATGA 1098 0.4818 MGNIGSSSASNRRRHGGGGGGSGRRIHPPPPPPPPVTPQPEITANRFVYPAAATPYHNYPGYYPPPVPLPAPYDHHHRPAAVEPMWGRYPPPAAPMPPTPYVEHQKAVTIKNDVNIKKETLRIEADEENPGKFLVSFTFDATVSGSITILFFAKEGEGCILTPMKEDSLPPVTVHFQQGLGQKFRQPAGTGIDFLQFEESELLKVGEMDIYPLVVKADAMLGDHDGSNETPKHGSNETRNEGSNETPNDGPNETPVTGITNSQITKAVFEKEKGEFQVKVVKQILWVNGLRYELQEIYGIGNSVESEVDGNDPGKECVICLSEPRDTTVLPCRHMVFTVSPFWINFSLDHFITRMMPVVVMDIIP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02846 365 PANTHER MAHOGUNIN 1 238 IPR045194 GO:0061630
Adu02g02846 365 MobiDBLite consensus disorder prediction 240 260 - -
Adu02g02846 365 MobiDBLite consensus disorder prediction 1 42 - -
Adu02g02846 365 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 238 - -
Adu02g02846 365 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 243 337 - -
Adu02g02846 365 MobiDBLite consensus disorder prediction 25 40 - -
Adu02g02846 365 MobiDBLite consensus disorder prediction 222 260 - -
Adu02g02846 365 PANTHER MAHOGUNIN 243 337 IPR045194 GO:0061630
Adu02g02846 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 301 340 IPR013083 -
Adu02g02846 365 MobiDBLite consensus disorder prediction 222 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02846 Adu-Chr2 94113924 94116995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02846 87 336 C3H Transcription Factor Family AT3G09770 60.938 5.61e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02846 - - aip:107626498 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02846 02 94113924 94116995 Adu02g02846 02 94113924 94116995 ECH
Adu06g01472 06 26865286 26867483 Adu02g02846 02 94113924 94116995 PCT