Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02836 ATGATAACGTTTATGGAGTCAAAGGAGAAAACAAGAGAAGCAGTGGAGAAGTGTCTGGACCCTCAGCTATGGCATGCGTGTGCAGGTGGCATGGTGCAGATGCCACAGGTGAACACAAAGGTCTATTACTTCCCTCAGGGCCATGCTGAGCATGCATGTGGTCCTGTGAACTTTAGGACCTGCCCCAAAGTGGTTCCACCTATGGTTCCATGCAGGGTTGCTGCTGTGAAGTACATGGCTGATCCTGAGACTGATGAGGTCTATGCCAAGCTTAGGCTTCTTCCTCTCAGTGGCAATGATGCTGATTATGGAAATGATGCTGGTGTTGTTGGAGGAGGTGGAATCCATGAACCTGAGGCTCAGGATAAGCCTGCTTCATTTGCAAAGACCTTGACTCAATCTGATGCCAACAATGGTGGGGGGTTTTCGGTTCCTAGGTATTGTGCCGAGACCATTTTCCCGCGGCTGGACTACTCGGCCGACCCTCCGGTACAGAGCATACTTGCAAAAGATGTTCACGGCGAGACGTGGAAGTTTAGGCACATTTATAGGGGCACGCCGAGGCGGCACCTCCTAACTACCGGTTGGAGTACTTTTGTGAATCACAAGAAGCTTGTGGCTGGGGACTCAATTGTGTTTTTGAGGGCGGACAATGGGGAACTGTGTGTTGGGATTCGGAGAGCAAAGAAGGGTCTAGGAGGTGGGCCTGAGGCTTCTTCAGGTTGGAATCCAGCGGGTGGAAATTGTCCAATGCCTTATGGTGGATTTCCAGGGTTTCTGAAGGAGGATGATATGAGGCTCTTGAGAAATGGATTGGACACTGGCACAAGAATGATGGGGAAGGGAAAAGTGCGGCCTGAAGGAGTCATTGAAGCTGCTACTCTTGCTGCCAACAAGCAACCTTTTGAGGTCGTTTACTACCCTCGCGCGAGTACGCCCGAGTTCTGTGTGAAGGCCTCACTGGTTGAAGCTGCACTGCAGATTAGGTGGTGCTCTGGAATAAGGTTCAAGATGGCCTTTGAAACCGAGGACTCGTCGCGAATTAGCTGGTTTATGGGTACCATATCTTCAGTTCAGGTTGCTGATCCCCTTGGATGGCCTAACTCACCTTGGAGGCTTCTTCAGGTTACATGGGACGAACCAGATTTACTTCAAAATGTGAGAAGAGTGAGTCCATGGCTTGTTGAATTGGTATCAAACATGCCTGCCCTTCATCTTTCACCTTTCTCACCGCCGCGGAAGAAATTAAGATTGCCCCAACACCCGGATTTTCCCCTTGATGGCCAAATTCATGTGCCAACATTTTCCAGCAACCTTCTAGGTCCGAGTAACCCCTATGGTTGTCTACCCGAAACTACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTATGGTATATCCTTATCAGATCTCCACCTCAGTAAACTGCAGTCAGGTCTATATTCGGCTGGTTTCCCGTCTCTTGATCACGCTGCTACACCAATCAGGGTCCCCAATAACTTACTATTGCAAAAACCCAGCACCAGTGAAAGTGTCTCTTGCTTGTTATCTATGGCGAGTTCTGTGCAATCCTCAAAGAAACCAGATGAAGGGAAGACACCACAGCTTGTGCTTTTTGGCCAAAAGATTCTCACAGAGCAGCAGCTCTCTCTCAGCAGCTCTGGTGATGCTGTCTCCCCTGTTCTTACCGGAAATAGTTCATCCGATGGAAATGCTGATAAACTCAATAATTTTTCTGATGGTTCTGGTTCTGCTCTGCATCAGCAAGGTATACCAGAACGCTCCTCTTGTGAGAGGTTCCCGTGGTATAGGGATCACCGTCAAGAAACCGAGGCCGGTTTGGAGACCGGTCACTGCAAAGTTTTTATGGAATCGGAAGATGTAGGTCGGACATTGGACCTCTCGTTGCTTGCTTCGTACGATGAACTGCACAGAAAGCTAGCAGACATGTTTGGCATCGAAAAATCCGAGATGCTAAGTCATGTGCTCTACCGAGACATAAATGGTGCAGTCAAACACCTTGGAGATGAACCATTCAGTGATTTCTCAAGAACAACAAAGAGATTGACTATTCTAATGGATTCCAGCAGTGACAATGTAGGAGTGTAG 2112 0.4882 MITFMESKEKTREAVEKCLDPQLWHACAGGMVQMPQVNTKVYYFPQGHAEHACGPVNFRTCPKVVPPMVPCRVAAVKYMADPETDEVYAKLRLLPLSGNDADYGNDAGVVGGGGIHEPEAQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQSILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRADNGELCVGIRRAKKGLGGGPEASSGWNPAGGNCPMPYGGFPGFLKEDDMRLLRNGLDTGTRMMGKGKVRPEGVIEAATLAANKQPFEVVYYPRASTPEFCVKASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSVQVADPLGWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPALHLSPFSPPRKKLRLPQHPDFPLDGQIHVPTFSSNLLGPSNPYGCLPETTPAGMQGARHAHYGISLSDLHLSKLQSGLYSAGFPSLDHAATPIRVPNNLLLQKPSTSESVSCLLSMASSVQSSKKPDEGKTPQLVLFGQKILTEQQLSLSSSGDAVSPVLTGNSSSDGNADKLNNFSDGSGSALHQQGIPERSSCERFPWYRDHRQETEAGLETGHCKVFMESEDVGRTLDLSLLASYDELHRKLADMFGIEKSEMLSHVLYRDINGAVKHLGDEPFSDFSRTTKRLTILMDSSSDNVGV 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02836 703 MobiDBLite consensus disorder prediction 556 592 - -
Adu02g02836 703 SUPERFAMILY DNA-binding pseudobarrel domain 121 228 IPR015300 -
Adu02g02836 703 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Adu02g02836 703 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Adu02g02836 703 PANTHER AUXIN RESPONSE FACTOR 7 694 - -
Adu02g02836 703 Pfam Auxin response factor 292 375 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu02g02836 703 Gene3D - 615 701 - -
Adu02g02836 703 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 694 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu02g02836 703 Gene3D - 125 229 IPR015300 -
Adu02g02836 703 CDD B3_DNA 126 227 IPR003340 GO:0003677
Adu02g02836 703 Gene3D - 329 403 - -
Adu02g02836 703 ProSiteProfiles PB1 domain profile. 617 700 IPR000270 GO:0005515
Adu02g02836 703 SMART B3_2 127 229 IPR003340 GO:0003677
Adu02g02836 703 MobiDBLite consensus disorder prediction 556 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02836 Adu-Chr2 94006597 94008967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02836 14 703 B3 DNA Binding Superfamily AT4G30080 57.610 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu02g02836 B3 1.2e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02836 - - gmx:100796522 1176.77