Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02830 ATGGACACTCACGTGAATGGTGATGCCACCTTCTGTTTGAGCGCCAACGGTCAGGTGCCACGTCACGACCCATTGAACTGGGGCGTCGCAGCCCAGGCTTTGGAGGGGAGCCACTTGGACGAGGTCAAGAGGATGGTCGCCGAGTACCGGAAGCCGACAGTTAAGCTTGGCGGCGAGACTTTGACTATATCTCAGGTGGCCGCCATTGCTGCCAAGGACCAAGGTGTCGCCGTCCAGCTCTCCGAGGAGTCCAGACCTGGGGTTAAGGCTAGTAGTGACTGGGTTATGAATAGCATGAACAATGGTACGGACAGCTATGGTGTCACCACCGGCTTTGGTGCCACTTCTCACCGGAGAACCAAACAGGGCGGTGCCTTGCAGAAAGAGCTCATTAGGTTCTTAAATGCTGGAATATTTGGCAATGGAACAGAGACAAATTGCACATTGCCACACACAGCTACTAGAGCAGCAATGCTAGTGAGGATCAACACACTCCTCCAAGGCTACTCAGGAATCAGATTTGAGATCTTGGAAGCCATAACCAAGCTTCTGAACAACAACATTACACCATGTTTGCCACTTAGGGGAACAATCACAGCCTCTGGTGACCTTGTTCCATTATCATACATTGCTGGTTTGTTAACTGGCAGACCAAATTCAAAGGCTGTTGGACCCAATGGAGAGATCCTTAATGCAAAAGAAGCATTCCAAGTGGCCGGAATCGGATCCGAGTTCTTCGAGTTGCAACCTAAAGAAGGCCTTGCACTGGTGAATGGCACTGCTGTTGGTTCCGGACTAGCCTCAATTGTCCTATTTGAGGCCAATATCCTAGCTGTCCTGTCGGAGGTTCTTTCGGCCATATTTGCGGAGGTGATGCAGGGGAAGCCAGAGTTCACTGACCATTTGACACACAAATTGAAGCACCATCCTGGACAAATTGAGGCTGCAGCCATAATGGAACACATTTTGGATGGTAGCTCATATGTCAAAGCCGCCAAGAAGTTGCACGAGATTGATCCGTTGCAAAAGCCTAAACAGGACAGATATGCACTTAGGACTTCACCTCAATGGCTTGGCCCTTTGATTGAAGTGATTAGATTCTCAACCAAATCAATTGAGAGGGAAATTAACTCTGTTAACGACAACCCTTTGATTGATGTGTCAAGGAACAAGGCTTTGCATGGTGGTAACTTTCAAGGTACTCCAATTGGTGTGTCTATGGATAACACAAGATTGGCCATTGCATCAATTGGGAAACTCATGTTTGCTCAGTTCTCTGAGCTTGTCAATGATTTCTACAACAATGGCTTGCCTTCAAATCTAAGTGCTAGTAGGAACCCCAGCTTGGATTATGGCTTCAAGGGAACTGAAATCGCCATGGCCTCTTACTGTTCCGAACTGCAATATCTTGCAAACCCGGTGACTAGCCATGTCCAGAGTGCTGAGCAGCATAACCAAGATGTGAACTCTCTTGGTTTGATTTCAGCTAGGAAAACAAATGAAGCTGTTGAGATTCTCAAACTTATGTCATCGACCTTCTTGATTGCACTTTGCCAAGCCATTGATTTGAGGCATCTGGAGGAGAATTTGAAGAACACCGTGAAGAACACTGTGAGCCAAGTTGCCAAGAGGACACTAACCACCGGCATCAACGGCGAACTCCACCCATCAAGATTCTGTGAGAAGGATCTTCTCAAGGTTGTTGATAGGGAGTACTGTTTTGCATACATTGATGATCCTTGCAGTGCTACATACCCTTTGATGCAGAAGCTAAGGCAAGTTTTGGTGGAACATGCACTTGCAAATGCTGAAACCGAGAAGAATGTGAACACCTCAATCTTCCAGAAAATTACAACCTTTGAGGAAGAATTGCAGACCCTTTTGCCTAAAGAAGTTGAGGGTGCAAGAATTGCATATGAGAATGGACAAAGTGCGTTACCGAACAAGATCAAGGAATGCAGGTCCTATCCATTGTACAAGTTTGTGAGGGAGGAGTTGGGGACTGAGATGCTAACTGGTGAGAAGGTTAGGTCACCTGGTGAAGAATGTGACAAATTGTTCACGGCAATGTGCCAAGGGAAGATCATTGATCCTCTTCTTGAGTGCATTTCTGAGTGGAATGGTGCTCCTCTTCCTTTATGTTAG 2145 0.4685 MDTHVNGDATFCLSANGQVPRHDPLNWGVAAQALEGSHLDEVKRMVAEYRKPTVKLGGETLTISQVAAIAAKDQGVAVQLSEESRPGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTETNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEILNAKEAFQVAGIGSEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGTEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISARKTNEAVEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGINGELHPSRFCEKDLLKVVDREYCFAYIDDPCSATYPLMQKLRQVLVEHALANAETEKNVNTSIFQKITTFEEELQTLLPKEVEGARIAYENGQSALPNKIKECRSYPLYKFVREELGTEMLTGEKVRSPGEECDKLFTAMCQGKIIDPLLECISEWNGAPLPLC 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02830 714 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 23 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Adu02g02830 714 Pfam Aromatic amino acid lyase 61 537 IPR001106 -
Adu02g02830 714 SUPERFAMILY L-aspartase-like 23 714 IPR008948 GO:0003824
Adu02g02830 714 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 16 714 - -
Adu02g02830 714 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841
Adu02g02830 714 Gene3D Fumarase/aspartase (Central domain) 261 709 - -
Adu02g02830 714 PANTHER HISTIDINE AMMONIA-LYASE 16 714 IPR001106 -
Adu02g02830 714 Gene3D - 527 648 IPR023144 -
Adu02g02830 714 CDD PAL-HAL 59 524 IPR001106 -
Adu02g02830 714 Gene3D - 14 260 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02830 Adu-Chr2 93933056 93937242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02830 8 714 Monolignol Biosynthesis Gene Families AT2G37040 81.716 0.0 1233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02830 K10775 - gmx:100803857 1289.25