Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02823 ATGAGCTCCGAAATAGTTCTCCATCAGCAATTTTCCCAATCAGAACCTCTTCCTATTTCCTCCACCGTCACCACCACAACCACTACCACCGGCGTCGCCCTCAGAAAATCCTCCGGCGCCGGCGCATTATCCACGACTTCATCACGCTCCAACAAGGACCGCCACACCAAGGTCAACGGCCGCGGCCGCCGCGTTCGCATGCCGCCGCTCTGTGCCGCCCGGATCTTTCAACTCACACGCGAGCTCGGCCACCGCTCCGACGGCGAAACCATCGAGTGGCTTCTCCGCCACGCTGAGCCATCCATCATCGCTGCAACCGGCACAGGTACCGTCCCTGCCGCCCCGGTCTCTTCCTCCGNNNNNNNNNNGTGTCCAGCCGTCTGCATCCGCCACTCCGACGATGGTCTGCGCCGGCGGGAGTCAGTGGCCGAGCTGCCGACTCGACCTCTGCCAGCCTCCTCCAGGAATGGAGTACGCCTCGGTGAACGGTCACCGATACATGCCGTTCACGTCGTTGCTGTTGCAGCCGGCCACGGCGGATGA 543 0.6206 MSSEIVLHQQFSQSEPLPISSTVTTTTTTTGVALRKSSGAGALSTTSSRSNKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAAPVSSSXXXXCPAVCIRHSDDGLRRRESVAELPTRPLPASSRNGVRLGERSPIHAVHVVAVAAGHGG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02823 180 MobiDBLite consensus disorder prediction 36 59 - -
Adu02g02823 180 Pfam TCP family transcription factor 50 121 IPR017887 -
Adu02g02823 180 ProSiteProfiles TCP domain profile. 51 105 IPR017887 -
Adu02g02823 180 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 47 130 IPR005333 GO:0003700
Adu02g02823 180 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 47 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02823 Adu-Chr2 93893769 93894637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02823 29 125 TCP Transcription Factor Family AT5G08330 59.794 8.37e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu02g02823 TCP 4.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02823 - - cam:101510590 130.568