Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02795 ATGGAGGAGGTTCAATTAGAGGAACAACAACATCAACTTCTTGTTAAAGGCAAACGAAGCAAGCGGCCGCGGCCGCCTTATTCGCCTTCGCCATCACCACCACCACCACTTGAATTTGCACCAATCATCCTCAAAAGAAACAACAACAACATGATGATGATGCCACCACCAACTACTAGTAATAGTGCAACTACTAGTACAACATTAGATGATGAAAACATGGCTTATTGTCTCATTCTATTGGCACAAGGACACCATCATCATCATCATCATCATAATAAAGCATCATCATCATCATCAGCACCATCATCACATCATGATGATCATCATGAGAAAAAGAATATCTACCAATGCAAGACGTGTAACAAATCATTCCCTTCATCTCAAGCACTTGGTGGACATAGAGCTAGCCACAAGAAATTATTATTACCAAACAACAAATCAAAGAGTAATAATAATAATGCTTATGACCATGATCATGAATTAGAGGACCTCAACACAACAACAACAACAACAAAAACAACAAGCACCATGCTCTCGTTGCAAGTATCATCATCAAATACCACAATAATAACAAAAAGAATTAGTACTAATAATAATAGTGCTAATAATAGTAGAAAATGCAAGCTACATGAATGTTCTATTTGTGGTGCTGGATTCTCATCCGGCCAAGCATTAGGGGGTCATATGAGAAGGCATAGAAATTTTGATGAAGGTGACAAAAACAAGAAACCAAGGAATCATTTTTTGAAGCTGGATTTGAATCTTCCAGCATCACCGGAAGATCATGATCAAAGAGAATCATCTAAGTTCCCATTTCAAATAAGGGAGAAAGTTATTGTCTTCTCTTCTTCTGCACCTTCTTTGGTGGATTGTCATTACTGA 885 0.3763 MEEVQLEEQQHQLLVKGKRSKRPRPPYSPSPSPPPPLEFAPIILKRNNNNMMMMPPPTTSNSATTSTTLDDENMAYCLILLAQGHHHHHHHHNKASSSSSAPSSHHDDHHEKKNIYQCKTCNKSFPSSQALGGHRASHKKLLLPNNKSKSNNNNAYDHDHELEDLNTTTTTTKTTSTMLSLQVSSSNTTIITKRISTNNNSANNSRKCKLHECSICGAGFSSGQALGGHMRRHRNFDEGDKNKKPRNHFLKLDLNLPASPEDHDQRESSKFPFQIREKVIVFSSSAPSLVDCHY 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02795 294 MobiDBLite consensus disorder prediction 1 40 - -
Adu02g02795 294 PANTHER ZINC FINGER PROTEIN ZAT5 49 294 - -
Adu02g02795 294 MobiDBLite consensus disorder prediction 24 40 - -
Adu02g02795 294 MobiDBLite consensus disorder prediction 87 112 - -
Adu02g02795 294 MobiDBLite consensus disorder prediction 128 159 - -
Adu02g02795 294 MobiDBLite consensus disorder prediction 1 15 - -
Adu02g02795 294 SUPERFAMILY beta-beta-alpha zinc fingers 113 139 IPR036236 -
Adu02g02795 294 SMART c2h2final6 116 138 IPR013087 -
Adu02g02795 294 SMART c2h2final6 211 233 IPR013087 -
Adu02g02795 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 211 238 IPR013087 -
Adu02g02795 294 Gene3D Classic Zinc Finger 184 269 - -
Adu02g02795 294 Gene3D Classic Zinc Finger 92 177 - -
Adu02g02795 294 MobiDBLite consensus disorder prediction 230 246 - -
Adu02g02795 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 116 138 IPR013087 -
Adu02g02795 294 MobiDBLite consensus disorder prediction 227 246 - -
Adu02g02795 294 ProSitePatterns Zinc finger C2H2 type domain signature. 118 138 IPR013087 -
Adu02g02795 294 SUPERFAMILY beta-beta-alpha zinc fingers 209 235 IPR036236 -
Adu02g02795 294 Pfam C2H2-type zinc finger 116 140 - -
Adu02g02795 294 Pfam C2H2-type zinc finger 211 234 - -
Adu02g02795 294 ProSitePatterns Zinc finger C2H2 type domain signature. 213 233 IPR013087 -
Adu02g02795 294 PANTHER ZINC FINGER PROTEIN ZAT5 49 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02795 Adu-Chr2 93667506 93668390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02795 13 294 C2H2 Transcription Factor Family AT5G03510 34.416 3.15e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu02g02795 zf-C2H2_6 1.7e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02795 - - adu:107476344 464.151