Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02772 ATGAGGTTCCAGAAACCGAGCAAGATCCAAGCTATAAGCTTGCCGATGATCTTGAATCCGCCGCATCGTGATTTGATCGCTCAGGCTCACAACGGTTCCGGCAAGACCACGTGCTTTGTTTTAGGGATGCTTAGTCGTGTGGATCCTTCGGTGCAAGCTCCTCAAGCTCTCTGCATTTGTCCAACGAGGGAGCTTGCTATTCAGAACACTGAAGTTCTCCGGAAGATGGGGAAGCACACAGGGATTAGCTCGGAGTGTGCCGTTCCGACAGATAGCAGGGATTCACTTCCAATTCAAAAACGGGAGCCAATTAAGGCTCAGGTGGTTATTGGGACTCCTGGCACCATAAAGAAGTGGATTTCTTTCAAGAAATTGGGTGTGACCAGATTGAAGATTCTTGTCTTTGATGAGGCTGATCAAATGCTTGCTGAGGATGGTTTTAAGGATGATTCCTTGAGGATAATGAAAGAAATAGAAAAATTCAATTCTAGCTGCCAGGTTCTTCTATTTTCTGCCACATTCAATGACATTGTCAAGAACTTTGTTGAGAGGACAGTTAAAAAGGACCATAATAAACTTTTTGTTAAGAAAGAAGAGCTTTCTTTAGACGCAGTGAAGCAGTATAAAGTTCGCTGCCCTGATGAGTTGTCGAAGATTGAGGTGATAAAAGATTACATATTCGAATTAGGAGAAAATGTGGGCCAAACCATCATATTCGTGCGCACGAGACAGAGTGCAAAAATGCTGCACAAGTCACTTGTCGACATGGGGTACGAGGTTACATCGATACAAGGTGCTCTTGACCATGAAGAGAGAGACAAAATTGTCAAAGAGTTCAGAGATGGTTTGACTCAAGTTCTTATATCCACGGATGTTCTTGCTCGAGGCTTTGATCAGCAACAGGTCAATTTGGTTATCAACTATGATCTCCCAATAAAACATACTGCGGAGTATACACGGGAATTTGAGCCTGATTATGAGGTGTACTTGCACAGAGTTGGTAGGGCTGGTCGATTTGGCCGTAAGGGGGCTGTGTTTAACCTAATATATGATGAAAAAGATGAAAGGCTGATGTCAAAGATCGAGAACCATTTTGGCACCCGTGTATCAGAGGTACGAGAAAAAAGTGTTGAAGACTATAAAGCTGCTCTTAAGGAAGCCGGCTTATTACAATGA 1176 0.4337 MRFQKPSKIQAISLPMILNPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPSVQAPQALCICPTRELAIQNTEVLRKMGKHTGISSECAVPTDSRDSLPIQKREPIKAQVVIGTPGTIKKWISFKKLGVTRLKILVFDEADQMLAEDGFKDDSLRIMKEIEKFNSSCQVLLFSATFNDIVKNFVERTVKKDHNKLFVKKEELSLDAVKQYKVRCPDELSKIEVIKDYIFELGENVGQTIIFVRTRQSAKMLHKSLVDMGYEVTSIQGALDHEERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPIKHTAEYTREFEPDYEVYLHRVGRAGRFGRKGAVFNLIYDEKDERLMSKIENHFGTRVSEVREKSVEDYKAALKEAGLLQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02772 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 358 IPR027417 -
Adu02g02772 391 Pfam DEAD/DEAH box helicase 8 180 IPR011545 GO:0003676|GO:0005524
Adu02g02772 391 SMART ultradead3 2 208 IPR014001 -
Adu02g02772 391 CDD SF2_C_DEAD 205 349 - -
Adu02g02772 391 SMART helicmild6 247 340 IPR001650 -
Adu02g02772 391 Pfam Helicase conserved C-terminal domain 218 340 IPR001650 -
Adu02g02772 391 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 370 - -
Adu02g02772 391 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 16 192 IPR014001 -
Adu02g02772 391 CDD DEADc_DDX19_DDX25 1 188 - -
Adu02g02772 391 Gene3D - 199 388 IPR027417 -
Adu02g02772 391 PANTHER DEAD-BOX HELICASE DBP80 2 370 - -
Adu02g02772 391 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 221 381 IPR001650 -
Adu02g02772 391 Gene3D - 1 198 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02772 Adu-Chr2 93513519 93516703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02772 3 372 Eukaryotic Initiation Factors Gene Family AT1G72730 37.600 4.89e-68 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02772 K18655 - gmx:100784739 637.491