Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02770 ATGGCGGCGGCGACGGTGGTTCCGGCGACGACAGTGGTTCCGGCGACGGCGTCGCTCTACGTTGGAGACCTGCACCCTGATGTGGTAGACAGCGAGCTGTTCGAGGCGTTCTCGGAGTTCAAGAGCATCGCCTCCGTTCGAATCTGCAAAGACTCTGCCACAGGGAGGTCACTCTGTTACGGTTACGTCAACTTCATTTCTCACCAAGACGCAAGTCGTGCAATTGAGTTGAAGAATCATTCTTTACTACATGGAAAAGTGATAAGGGTCATGTGGTCTCGTCGCGATCCTGATGTGAGAAAAAGTGGCAGAGGGAATGTTTTTGTTAAGAACTTAGCTGAATCCATAGATAATGCGGGATTACATGATTTATTTCAAAAGTTTGGAAATATCTTGTCCAGCAAAGTTGTGATGTCGGAGGATGGGAAGAGCAAAGGGTATGGCTTTGTTCAATTTGAGTCAGAGGAATCTGCAAATGCTGCCATCGAGAAGTTGAATGGCATTACTGTTAAAGATAAGCAGATATATGTTGGGAATTTTGTGAAAAAGAGTGAACGCATACTGCCTGATCCTGAAGCCAAATATACAAATATATACATCAAGAATTTGGACTCAGATATTACGGAAGAACTCCTTCAGAAGAAGTTTTCTTCTTTTGGAAAAATTATGAGCCTGGCTATAGCAAAAGATGCCAATGGGATGTCAAAGGGTTTTGCATTTGTGAACTATGATAACCCAGAGGAAGCTAAACAGGCAATGGAAGCAATGAATGGATCACAATTTGGTTCAAAGATTCTATATGTAGCCAGGGCACAAAAGAAGGCTGAGCGTGAGCAGATCTTGCATCATCTGTTTGAAGAGAAACGTAAGGAACACATCTTGAAATACAAGGGATCAAACATTTATGTGAAGAACATTAATGATAGTGTCACTGATGACCAACTACGAGAGCACTTCAGTGCATGTGGCACAATTACATCTGCTAAAGTCATGCAAGATGAGAAAGGTGTAAGCAAGGGGTTTGGCTTTGTCTGCTTCTCTACCCCTGAGGAGGCCCATAAAGCAGTGAACACTTTTCATGGATGCATGTTCCATGGTAAACCACTATATGTTGCTCTTGCCCAGAGGAAAGAGGATAGGCAAACACAGTTGCAGCTCTACTTTTCTCAGCAATTACCAGGGCTAGGTGCACCTTCAAATGCAGTTATTCCTGGTGGATATCCTCGTTTCTACTATACTGGTGGTGTTCTTTCACATGTCCCTTCTCAACCTGGGATGATGTATCAACATCTTGGATCGAGGTCAGGTTGGAGGGCTAATAATGCTTTTGCACCTCCCACTAGATCATTTCAGCAGTCTGCAGCTCCTAACGTTTCAAACAATACTAAGCAGCATAGGCAAAACAGAGGTAGGATGAACGGACACACAAATTCACATGGAAAAGCATACTCTTCTCAGTCAGCAGCCTCTTCTAAAGACTCAAGTGCCCAGCAGTCTGGACAGGCTATTTTTGTTCTCGGTGGACACCGGAATGTGATGGAAAAAGGATCTGGAATTTCATCCTCTGGAGGGTCTCAGGGATCAGAAATGCTGCATAGTATGCTTGCTACTGCTGTCCCCGAGCAACAGAAACAGATACTTGGCGAGCGTCTTTTCCCACTTATCAAGAAACTCAAGCCTAACTTGGCATCAAAGATTACAGGAATGCTTTTGGAGATGGACAATGCAGAATTGCTGCTGCTCCTGGAATCACCGGAATCACTTTCTGCAAAGGTGGAAGAAGCTGTGCAAGTGCTTAAGAATTCCACCACCAAGGTTTCTGGCCAGGAAGCATTTCATCCGAACTTGCTTTCGGCCGAAAACCCGTCATCTTCAACCTCCACAACCGCCGTCGCCGCCGCCAAAAACCGCCGACGTCTGATCTTAGTTGGCCCATTTTCCCCCTCACCCCTGCTCCTCTCGCCCAAGTTGAATTCTCTGAACAGGAACCGTGATTCATCCCCTGAGAGGGGTTCCAAGAGGCGGCAGAGAAGCAGTCGTCGCAGCAGTCACGTTAGCAGCAGTAGTCGATCCCGGAGGCAGAGTAGGCGTGACTCAGATAGTTCCTATGAAGATGACAGTGATGATAGTGCTGATAGGGGTGGTAGCAGGAATAAGAAAAAATCCTCCAGGAACATCACTGAAGAGGAAATAGCACAGTACTTGGCTAAAAAGGCCCAGAGAAAGGCTTTGAAAGTTGCTAAGAAATTAAAGACTAATACTGTATCTGGGTATTCAAATGACTCGAATCCGTTTGGTGACTCTAATCTTAATGAGAAGTTTGTCTGGCGTAAGAAGATTGAGCGCGATGTTTCTCATGGGGTGCCTATTGATGCTTTTTCAGTTAAAGCTGAGAAAAAGAGACAGAGAGAAAGGATGGCTGAAATTGAAAAAGTGAAAAAAAGAAGAGAGGAAAGGGCACTTGAGAAAGCACAACATGAGGAAGAGATGGCTTTGTTAGCTAGAGAACGTGCTAGAGCTGAGTTCCAGGACTGGGAAAAAAGAGAAGAGGAGTTTCATTTTGATCAAAGCAAGGTTAGGTCAGAGATTAGATTGCGTGAAGGGCGTGCCAAGCCAATTGATGTTCTAACCAAGCAGCTGAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACGGTGAAAGAAATGGAAGAGCTTCGTGATGACATCAAAATGCATCTGGACCTTGACAGGGCCACCCCCACCCATGAACAATATTGGGAGGCACTTCTTCTGGTGTGTGATTGGGAGCTAGCTGAAGCACGAAGAAAGGATGCACTTGATCGAGCTAGGGTGCGAGGAGAAGAACCTCCAGCCGAGCTGCTTGCAGAAGAAAGGGGTCTGCATGCTAGTGTTGAGGAGGACGTGAAGAAGCTTTTGGAGGGGAAGACACATGCAGAGTTGGAAGCTTTACAAGCTCATATTGAGTCAGAGATGCGTACTGGTACTGCAAAGGTGGTTGAGTATTGGGAGGCTGTTTTAAAACGTCTCCATATATACAAGGCCAAGGCTTGTTTGAAAGAAATTCATGCCAAAATGTTGCGCAAGCATTTGCAACTCCTTGAACAACCATTGGATGGTGAGGATAAAGTGGAAGATGCTCATGCTTTCAAATCTGAGGAAGAAACTGAGGATCTCAAGGTCCGATCCGCAGATGAATCATTTTCACCAGAGCCCATTAGAGCAAAGGAACATGAAGTTGAAGATGAGCCCGGGTCATTTTCGCCAGAACTATTGCACGGTGATGAAGATGAGGAAGCCATTGATCCTGAAGAAGATCGGGCACTATTGGAGCAGAAACGTATGGCTGTATTGGAAGAGCAGCAAAGACGTATTCAGGAAGCGATGGCGTCAAAGCCTGCTCCATCTGAAGATAACTTCGAGATGAAAGCCATGAAAGCTATGGGAGCTATGGAAGATGGAGATGCAGTGTTTGGCTCTGGTGCTGAAGTGAATCTAGATTCACAGCAGGTTTATTGGTGGCACGACAAGTACCGGCCGAGGAAGCCGAAATATTTCAATCGCGTTCACACTGGATACGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAATCCACCTCCAAAGATTGTGCAAGGGTATAAATTCAATATTTTCTACCCTGATCTTGTAGACAAGACAAAAGCCCCAACCTACACTATTGAGAAGGATGGCAGCAATGGCGAGACTTGCATCATAAGATTCCATGCAGGGCCGCCATACGAAGATATCGCTTTCCGCATTGTTAACAAGGAATGGGAGTATTCTCATAAGAAGGGATTCAAGTGCACCTTTGAGCGCGGAATTCTACACGTTTACTTCAATTTCAAACGCTACCGTTACCGCCGATAA 3924 0.4526 MAAATVVPATTVVPATASLYVGDLHPDVVDSELFEAFSEFKSIASVRICKDSATGRSLCYGYVNFISHQDASRAIELKNHSLLHGKVIRVMWSRRDPDVRKSGRGNVFVKNLAESIDNAGLHDLFQKFGNILSSKVVMSEDGKSKGYGFVQFESEESANAAIEKLNGITVKDKQIYVGNFVKKSERILPDPEAKYTNIYIKNLDSDITEELLQKKFSSFGKIMSLAIAKDANGMSKGFAFVNYDNPEEAKQAMEAMNGSQFGSKILYVARAQKKAEREQILHHLFEEKRKEHILKYKGSNIYVKNINDSVTDDQLREHFSACGTITSAKVMQDEKGVSKGFGFVCFSTPEEAHKAVNTFHGCMFHGKPLYVALAQRKEDRQTQLQLYFSQQLPGLGAPSNAVIPGGYPRFYYTGGVLSHVPSQPGMMYQHLGSRSGWRANNAFAPPTRSFQQSAAPNVSNNTKQHRQNRGRMNGHTNSHGKAYSSQSAASSKDSSAQQSGQAIFVLGGHRNVMEKGSGISSSGGSQGSEMLHSMLATAVPEQQKQILGERLFPLIKKLKPNLASKITGMLLEMDNAELLLLLESPESLSAKVEEAVQVLKNSTTKVSGQEAFHPNLLSAENPSSSTSTTAVAAAKNRRRLILVGPFSPSPLLLSPKLNSLNRNRDSSPERGSKRRQRSSRRSSHVSSSSRSRRQSRRDSDSSYEDDSDDSADRGGSRNKKKSSRNITEEEIAQYLAKKAQRKALKVAKKLKTNTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSHGVPIDAFSVKAEKKRQRERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKREEEFHFDQSKVRSEIRLREGRAKPIDVLTKQLNGSDDLDIEINEPYMVFKGLTVKEMEELRDDIKMHLDLDRATPTHEQYWEALLLVCDWELAEARRKDALDRARVRGEEPPAELLAEERGLHASVEEDVKKLLEGKTHAELEALQAHIESEMRTGTAKVVEYWEAVLKRLHIYKAKACLKEIHAKMLRKHLQLLEQPLDGEDKVEDAHAFKSEEETEDLKVRSADESFSPEPIRAKEHEVEDEPGSFSPELLHGDEDEEAIDPEEDRALLEQKRMAVLEEQQRRIQEAMASKPAPSEDNFEMKAMKAMGAMEDGDAVFGSGAEVNLDSQQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 1307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02770 1307 Gene3D - 183 282 IPR012677 -
Adu02g02770 1307 MobiDBLite consensus disorder prediction 652 725 - -
Adu02g02770 1307 CDD RRM1_I_PABPs 18 97 - -
Adu02g02770 1307 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 527 604 IPR002004 GO:0003723
Adu02g02770 1307 SMART poly_2 539 602 IPR002004 GO:0003723
Adu02g02770 1307 SUPERFAMILY PABC (PABP) domain 531 609 IPR036053 GO:0003723
Adu02g02770 1307 SMART rrm2_1 300 372 IPR003954 GO:0003676
Adu02g02770 1307 SMART rrm2_1 197 269 IPR003954 GO:0003676
Adu02g02770 1307 SMART rrm2_1 18 91 IPR003954 GO:0003676
Adu02g02770 1307 SMART rrm2_1 106 178 IPR003954 GO:0003676
Adu02g02770 1307 SMART CactinC_cactus_3 1183 1307 - -
Adu02g02770 1307 Coils Coil 799 843 - -
Adu02g02770 1307 Gene3D - 9 101 IPR012677 -
Adu02g02770 1307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 301 369 IPR000504 GO:0003723
Adu02g02770 1307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 198 265 IPR000504 GO:0003723
Adu02g02770 1307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 19 89 IPR000504 GO:0003723
Adu02g02770 1307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 107 175 IPR000504 GO:0003723
Adu02g02770 1307 Pfam Cactus-binding C-terminus of cactin protein 1183 1307 IPR019134 GO:0005515
Adu02g02770 1307 SMART rrm1_1 197 269 IPR000504 GO:0003723
Adu02g02770 1307 SMART rrm1_1 106 178 IPR000504 GO:0003723
Adu02g02770 1307 SMART rrm1_1 300 372 IPR000504 GO:0003723
Adu02g02770 1307 SMART rrm1_1 18 91 IPR000504 GO:0003723
Adu02g02770 1307 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 670 1307 - -
Adu02g02770 1307 Pfam Conserved mid region of cactin 835 1032 IPR018816 -
Adu02g02770 1307 Pfam Poly-adenylate binding protein, unique domain 535 599 IPR002004 GO:0003723
Adu02g02770 1307 MobiDBLite consensus disorder prediction 439 499 - -
Adu02g02770 1307 MobiDBLite consensus disorder prediction 1058 1105 - -
Adu02g02770 1307 MobiDBLite consensus disorder prediction 691 725 - -
Adu02g02770 1307 TIGRFAM PABP-1234: polyadenylate binding protein, human types 1, 2, 3, 4 family 17 600 IPR006515 GO:0003723
Adu02g02770 1307 Gene3D - 283 385 IPR012677 -
Adu02g02770 1307 Gene3D - 102 182 IPR012677 -
Adu02g02770 1307 SUPERFAMILY RNA-binding domain, RBD 297 392 IPR035979 GO:0003676
Adu02g02770 1307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 299 376 IPR000504 GO:0003723
Adu02g02770 1307 SUPERFAMILY RNA-binding domain, RBD 17 184 IPR035979 GO:0003676
Adu02g02770 1307 PANTHER BNAC05G02180D PROTEIN 670 1307 - -
Adu02g02770 1307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 105 177 IPR000504 GO:0003723
Adu02g02770 1307 SUPERFAMILY RNA-binding domain, RBD 188 279 IPR035979 GO:0003676
Adu02g02770 1307 MobiDBLite consensus disorder prediction 1058 1103 - -
Adu02g02770 1307 Gene3D - 525 615 - -
Adu02g02770 1307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 95 IPR000504 GO:0003723
Adu02g02770 1307 CDD RRM4_I_PABPs 298 376 - -
Adu02g02770 1307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 196 273 IPR000504 GO:0003723
Adu02g02770 1307 CDD RRM2_I_PABPs 103 179 IPR045305 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02770 Adu-Chr2 93483854 93493983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02770 14 619 Eukaryotic Initiation Factors Gene Family AT2G36660 53.746 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02770 K25058 - gmx:100780087 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02770 02 93483854 93493983 Adu02g02770 02 93483854 93493983 ECH