Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02761 ATGGATTGGAATAATAATGGCAGCACTAGATCCTTTGTTCCTCGACCTGATTCTTCTTTCAGCTTCCTCTACAACTATACCTACACCAACCCTTACCCAGAAATGAAACAAGGAGGATCATCAGCAATGGTGGAGGGTCCATCATCATCAACAACATTATCAATGGAGAAAATGAACAACAACAACAACAACTTAATGATGGAGAAGAAAAAGAGGCTAACAAATGAACAGCTGGAGTCACTAGAAAGAAGCTTCCAGAAGGAAATAAAGTTGGATCGCCAAATTGCTGTGTGGTTCCAAAATAGACGTGCAAGGTGGAAGGCTAAGCAACTTGAGCATTTGTATGATTCTCTCAAACAAGAGTTTGATCTCATTTCCAAGGAGAAACAAAAGCTTCAACAAGAGGTAATGAAATTGAAGGGAATACTGAGAGATCATCAAGGTTGTAGAACTACTCAGATATCAAATTACACTGAAATCTCTGGTGGAGGTGGTGGTGGTGGTGACGAGACTACCGTAGAAAGCACTTCTGAGGCCCTACGCTGTTCCAACACCAACAAATCATCATCAATTTCAAGAGCTACTGCTTCCATTGTTCATAATCATAATAATAATAATAATAATGGAAATTGCTCTTTCACTGTTGAAGACTACAACACTACAGTTCCACCAACAGTTCTTCCCTATTGGCCTGCTGTTCCTTATTACCCTTAA 714 0.3978 MDWNNNGSTRSFVPRPDSSFSFLYNYTYTNPYPEMKQGGSSAMVEGPSSSTTLSMEKMNNNNNNLMMEKKKRLTNEQLESLERSFQKEIKLDRQIAVWFQNRRARWKAKQLEHLYDSLKQEFDLISKEKQKLQQEVMKLKGILRDHQGCRTTQISNYTEISGGGGGGGDETTVESTSEALRCSNTNKSSSISRATASIVHNHNNNNNNGNCSFTVEDYNTTVPPTVLPYWPAVPYYP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02761 237 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 223 - -
Adu02g02761 237 ProSiteProfiles 'Homeobox' domain profile. 92 109 IPR001356 GO:0003677
Adu02g02761 237 SUPERFAMILY Homeodomain-like 53 111 IPR009057 -
Adu02g02761 237 Pfam Homeobox associated leucine zipper 109 143 IPR003106 GO:0006355|GO:0043565
Adu02g02761 237 SMART HOX_1 67 113 IPR001356 GO:0003677
Adu02g02761 237 Coils Coil 64 84 - -
Adu02g02761 237 Coils Coil 101 135 - -
Adu02g02761 237 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 223 IPR045224 GO:0003700
Adu02g02761 237 Gene3D - 89 122 - -
Adu02g02761 237 CDD homeodomain 69 110 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02761 Adu-Chr2 93407184 93409225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02761 1 139 Homeobox Transcription Factor Family AT5G03790 45.509 1.35e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu02g02761 HALZ 1.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02761 - - aip:107628062 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02761 02 93407184 93409225 Adu02g02761 02 93407184 93409225 ECH
Adu10g02307 10 97984647 97987038 Adu02g02761 02 93407184 93409225 PCT
Adu02g02761 02 93407184 93409225 Adu06g01614 06 50339936 50340887 PCT