Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02738 ATGCATTCTACTTCTGGTTCTACTTCTACTGGCCGTCACCCCGTGTATCGCGGGGTGAGGCGTAGAAGTAGTGGCAAATGGGTGTCGGAAATTCGGGAGCCGAAGAAGCCTAATAGAATTTGGTTAGGGACATATCCTACTCCAGAAATGGCTGCAGTTGCATATGATGTCGCCGTCCTTGCCCTAAAAGGCAAAGACGCCGAGTTAAACTTCCCTAACTCGGCTTCTTCGCTCCCGGTTCCGGCTACCTTATCCCCACGTGACATTCAAATGGCTGCGGCTAGTGCTGCCGCCGCGGCCGGAGCAGCAAAAGATGCCCTAAATGCTGAAGGATCAAGTTCAAGCCAAGGGAATATTAATAAAAGCAATGAAAATAATAATAATAATGTTCCTTCATCATCAATGGCACATGATTTTGTGGATGAGGATTTGATCTTTGACATGCCTAATGTTCTTGTGAACATGGCAGAAGGAATGCTTCTTAGTCCTCCTCCTTTTGACATTGGTGGTGGTGAAGATGAACCAGAAAACATGGATGATGAGCCAAGCCTGTGGAATTTCCCTTAA 567 0.4674 MHSTSGSTSTGRHPVYRGVRRRSSGKWVSEIREPKKPNRIWLGTYPTPEMAAVAYDVAVLALKGKDAELNFPNSASSLPVPATLSPRDIQMAAASAAAAAGAAKDALNAEGSSSSQGNINKSNENNNNNVPSSSMAHDFVDEDLIFDMPNVLVNMAEGMLLSPPPFDIGGGEDEPENMDDEPSLWNFP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02738 188 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Adu02g02738 188 MobiDBLite consensus disorder prediction 108 134 - -
Adu02g02738 188 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Adu02g02738 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 5 188 - -
Adu02g02738 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 188 - -
Adu02g02738 188 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Adu02g02738 188 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Adu02g02738 188 MobiDBLite consensus disorder prediction 1 28 - -
Adu02g02738 188 MobiDBLite consensus disorder prediction 164 188 - -
Adu02g02738 188 Pfam AP2 domain 14 64 IPR001471 GO:0003700|GO:0006355
Adu02g02738 188 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Adu02g02738 188 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Adu02g02738 188 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02738 Adu-Chr2 93189145 93189711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02738 11 188 AP2-EREBP Transcription Factor Family AT2G36450 62.703 2.04e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu02g02738 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02738 - - vvi:100261339 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02738 02 93189145 93189711 Adu02g02738 02 93189145 93189711 ECH
Adu06g01686 06 59651620 59652222 Adu02g02738 02 93189145 93189711 PCT