Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02684 ATGTCTATAAACCACTACTCTTCTTCCCCTATGGACCTCCAAGAAACGACACCCTTGTGGTGGACTCAACAACCACAACCTCCTCTCCACTTCAACAATAACATTCATAATTCCCAAAACACCCCTCGCTTCAACCTCAACAACGAAGAAACCGACACCGCCACTACGTCACACGAAGGAGACGAAGAAGAAGAAGAAGAGAATCTTCCAGAACCAATCCAACAAGACGATAACAACCACCAACAACAACAACATAACGAGAGAATGTTCGAGAAGCCGTTAACGCCAAGCGACGTTGGAAAGCTTAACCGTCTCGTCATCCCAAAGCAACACGCCGAGAAGTACTTCCCTCTAACTGCCTCCGCGACTGAGTCAGGCACCGAGTGCAAGGGTTTGTTACTGAGTTTCGAGGACGAGTCAGGAAAGTGTTGGCGATTCCGTTACTCGTATTGGAACAGCAGCCAGAGCTATGTGCTAACCAAAGGATGGAGCCGTTACGTTAAGGACAAGCGTCTCGACGCCGGCGACGTCGTTTCCTTCGAGCGCCACCGCGCTGACTCTCAGAGGCTATTTATTCGCTGGAGGCGCCGATCTTCTCCGGTGGCGCAAGTTAGCAGAGCGCCTCACGCTGATGTGAATAATGACAAGACTGGTGTAGCGTGGACTAGCGGATTCTATTGTGCGCACCCTCCTTATCCTGCGCATCATCTTCATAACCAACACTTAACATATCCACAACAACATGAGGGGAGTAGTAGTAGTCTTCATGCAGTAGGGTCCCAAGGGAAGAACCAAAGGATGAGACCAGTTGGAAACTGTTCAAGTTCAAGTTCGAAGGTACTTAGGTTGTTTGGGGTGAACATGGAATGCCAAACTCAACATGATGATGATTCTCAACCTTCAACAACAAAAGAGGATACTAGTAATTCAGATACCCACCATTTCTACCACCATAATTATTATCATCAACCTTCTAATAATTCTCACCCTAATCACAATCACATGTTACCTCATCAACAATCATACTACTATTAG 1035 0.4696 MSINHYSSSPMDLQETTPLWWTQQPQPPLHFNNNIHNSQNTPRFNLNNEETDTATTSHEGDEEEEEENLPEPIQQDDNNHQQQQHNERMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLTASATESGTECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVSFERHRADSQRLFIRWRRRSSPVAQVSRAPHADVNNDKTGVAWTSGFYCAHPPYPAHHLHNQHLTYPQQHEGSSSSLHAVGSQGKNQRMRPVGNCSSSSSKVLRLFGVNMECQTQHDDDSQPSTTKEDTSNSDTHHFYHHNYYHQPSNNSHPNHNHMLPHQQSYYY 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02684 344 MobiDBLite consensus disorder prediction 56 72 - -
Adu02g02684 344 Gene3D - 78 206 IPR015300 -
Adu02g02684 344 MobiDBLite consensus disorder prediction 292 344 - -
Adu02g02684 344 ProSiteProfiles B3 DNA-binding domain profile. 90 198 IPR003340 GO:0003677
Adu02g02684 344 SMART B3_2 90 198 IPR003340 GO:0003677
Adu02g02684 344 Pfam B3 DNA binding domain 90 198 IPR003340 GO:0003677
Adu02g02684 344 MobiDBLite consensus disorder prediction 22 53 - -
Adu02g02684 344 MobiDBLite consensus disorder prediction 298 318 - -
Adu02g02684 344 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 39 311 - -
Adu02g02684 344 MobiDBLite consensus disorder prediction 22 97 - -
Adu02g02684 344 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 39 311 IPR044800 GO:0003700
Adu02g02684 344 MobiDBLite consensus disorder prediction 319 344 - -
Adu02g02684 344 CDD B3_DNA 88 188 IPR003340 GO:0003677
Adu02g02684 344 MobiDBLite consensus disorder prediction 244 275 - -
Adu02g02684 344 SUPERFAMILY DNA-binding pseudobarrel domain 85 198 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02684 Adu-Chr2 92742931 92745674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02684 87 305 RAV Transcription Factor Family AT5G06250 50.644 1.83e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu02g02684 B3 3.3e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02684 - - gmx:100795470 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02684 02 92742931 92745674 Adu02g02684 02 92742931 92745674 ECH
Adu06g01799 06 72616321 72619007 Adu02g02684 02 92742931 92745674 PCT