Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02682 ATGGGGCGAGTTCGCACAAAAACGGTGAAAAAATCCTCGAGGCAAGTGATCGAGAGGTACTACTCCAAAATGACGCTGGATTTTCACACGAACAAGAAGGTTCTAGAAGAAGTAGCGCTAATCCCATCGAAGAGGCTCCGAAACAAGATCGCAGGGTTCTCAACGCACCTGATGAAGAGGATCCAGAAAGGACCGGTTCGTGGAATCTCGCTGAAGCTGCAGGAAGAGGAGAGAGAGAGGCGCATGGATTTCGTTCCAGAAGTTTCCGCCATTAATGTCGATAGCATCGAGGTCGATAATTCCGTTTGGCCGCGGTGGTTTTGCTGGCGGCGCTGGTAG 339 0.5103 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKVLEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPEVSAINVDSIEVDNSVWPRWFCWRRW 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02682 112 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Adu02g02682 112 PANTHER 40S RIBOSOMAL PROTEIN S17 1 100 - -
Adu02g02682 112 Pfam Ribosomal S17 1 101 IPR001210 GO:0003735|GO:0005840|GO:0006412
Adu02g02682 112 PANTHER 40S RIBOSOMAL PROTEIN S17 1 100 IPR001210 GO:0003735|GO:0005840|GO:0006412
Adu02g02682 112 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Adu02g02682 112 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Adu02g02682 112 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02682 Adu-Chr2 92721941 92722752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02682 1 99 Cytoplasmic Ribosomal Protein Gene Family AT3G10610 88.889 4.11e-63 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02682 K02962 - rcu:8270486 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02682 02 92721941 92722752 Adu02g02682 02 92721941 92722752 ECH