Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02671 ATGTCCGGCGGCGCTGGACCTCCGCCGCAGCATACCAAGCCGGATGATTCCGGCGTCCCTATCCGGCCTCCGTTAAAGCGCCACCTCGCATTTGCGTCGATGAAGCCGTCGTTCGCTCAGCCGGATGAGTACCATAGCTTCTCCTCCTCCTCCGGTGCTCCTGACTCCGGCAGGAAACTCGCCGCCGATCAACAGGCTGAAGTCGTTGTTGTTAGATCTCCGCACATTAAGAGGAAGGGTGGAATGACTAATATTGAAGGAGACTCGCAAAAGCTTAGTAATGTTCCTGGATCAGCAAACGCAGCAAGTAGTCCTTTCAAAACTCCAGTGTCGTCCAAAGGGGGAAGGACGCATGCTAAGTCAAAGGTTTCCAAAGAAGGAATGCAATGCCCTCAGACTCCCATCTCCAATTCTGGTTCCCCATCTCCTCTTACTCCTGCTGGAAGCTGTCGCTATGACAACTCCTTAGGTATGTTGACAAAAAAGTTTGTCAATTTGGTAAAGCATTCAGAAGATGGCAATCTTGACCTAAATCAAGCAGCAGAAACTTTGGAGGTGAAAAAGAGGAGGATATATGACATAACTAATGTTTTGGAAGGCATTGGTCTCATTGAAAAGAAGCTCAAGAACAGAATACATTGGAAGGGAACAGAATCTTCTTCCGGTGACGTGGATGGTGATATCTCGATGCTTAAGGAAGAAGTTGAGAGACTCTCCTTGGAAGAGCATAGATTAGATGACCGAATAAGGGAAATGCAAGAAAGGCTTAGGAGTTTGAGCGAAGATGAAAATAAGCAGAAGTTCCTTTTTGTGACTGAAGAAGATATTAAGGCCGTACCTTGCTTCCAGAATGAAACCCTGATAGCAATTAAAGCTCCACATGGAACCACCCTAGAAGTCCCTGATCCTGAGGAAGCTGTTGACTATCTGCAGAGGAGATATAGGATCATTCTTAGAAGTACTATGGGGCCCATTGATGTTTACCTTATCAGTCAATTCGAAGAGAGATTTGAAGAGATAAATGGTCCTGAGCCCCCTGTGAGCCTCCCGCTTCCTTCGAGTTCAGGGTCCAATGAACCACCAGTGGCAGAAACAGTTCCTGCGGAGTGCAGTGCAAAAGGACTAGAACCTCAACCTCAGATCCCCTCTCACACGTACTCTGATCTGAACACATCACAAGACTTTGGTGGGGGCATGATGAAGATTGTCCCTTCAGATGCTGATAATGATGCAGATTATTGGCTTCTATCAGATGCTGACATTAGCATAACAGATATGTGGAGAACAGATTCTAGTGTTGATTGGAATGGAGTAGACATGCTTCATCCCGACTTCGGAAATATCCCTAGGCCTCAAACTCCATCATCTGGGATCGCTGAAACTCCATCCACTGTAACTAATCCTAATCAGAGGTGA 1416 0.4668 MSGGAGPPPQHTKPDDSGVPIRPPLKRHLAFASMKPSFAQPDEYHSFSSSSGAPDSGRKLAADQQAEVVVVRSPHIKRKGGMTNIEGDSQKLSNVPGSANAASSPFKTPVSSKGGRTHAKSKVSKEGMQCPQTPISNSGSPSPLTPAGSCRYDNSLGMLTKKFVNLVKHSEDGNLDLNQAAETLEVKKRRIYDITNVLEGIGLIEKKLKNRIHWKGTESSSGDVDGDISMLKEEVERLSLEEHRLDDRIREMQERLRSLSEDENKQKFLFVTEEDIKAVPCFQNETLIAIKAPHGTTLEVPDPEEAVDYLQRRYRIILRSTMGPIDVYLISQFEERFEEINGPEPPVSLPLPSSSGSNEPPVAETVPAECSAKGLEPQPQIPSHTYSDLNTSQDFGGGMMKIVPSDADNDADYWLLSDADISITDMWRTDSSVDWNGVDMLHPDFGNIPRPQTPSSGIAETPSTVTNPNQR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02671 471 PANTHER TRANSCRIPTION FACTOR E2F 14 448 IPR015633 GO:0000978|GO:0006357
Adu02g02671 471 Coils Coil 228 262 - -
Adu02g02671 471 PANTHER E2F TRANSCRIPTION FACTOR 3-RELATED 14 448 - -
Adu02g02671 471 MobiDBLite consensus disorder prediction 444 471 - -
Adu02g02671 471 MobiDBLite consensus disorder prediction 126 146 - -
Adu02g02671 471 SUPERFAMILY E2F-DP heterodimerization region 228 332 IPR037241 -
Adu02g02671 471 SMART E2F_TDP_2 151 216 IPR003316 GO:0005667|GO:0006355
Adu02g02671 471 MobiDBLite consensus disorder prediction 378 392 - -
Adu02g02671 471 MobiDBLite consensus disorder prediction 1 146 - -
Adu02g02671 471 MobiDBLite consensus disorder prediction 86 117 - -
Adu02g02671 471 Gene3D - 145 218 IPR036388 -
Adu02g02671 471 CDD E2F_DD 231 332 IPR032198 GO:0046983
Adu02g02671 471 Gene3D - 222 332 - -
Adu02g02671 471 SUPERFAMILY "Winged helix" DNA-binding domain 151 214 IPR036390 -
Adu02g02671 471 Pfam E2F transcription factor CC-MB domain 231 331 IPR032198 GO:0046983
Adu02g02671 471 MobiDBLite consensus disorder prediction 344 392 - -
Adu02g02671 471 MobiDBLite consensus disorder prediction 449 471 - -
Adu02g02671 471 Pfam E2F/DP family winged-helix DNA-binding domain 153 216 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02671 Adu-Chr2 92589617 92593788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02671 17 471 E2F-DP Transcription Factor Family AT2G36010 54.681 2.14e-160 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Adu02g02671 E2F_CC-MB 1.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02671 K06620 - gmx:100811762 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02671 02 92589617 92593788 Adu02g02671 02 92589617 92593788 ECH