Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02644 ATGGATAATGAAATTGAAGTTCCTCAATATTTCATATGTCCAATTTCACTTCAAATCATGAAGGATCCTGTGATTGCCATAACAGGAATCACATATGATAGAGAAAGCATTGAGAAATGGCTTTTCAAGAACAAGAACACAACATGTCCAGTTACCAAAATGCCCCTACCAAATGATTCTGATCTTACACCAAACCATACCCTTCGCCGTTTGATCCAAGCATGGTGCACTCAAAATTCTTCACTGGGAATTGATAGAATCCCAACACCAAAGCCCCCACTTAACAAAGTTCAAGTTTTGAAGCTCCTTAAGGATCTTAAGGACCCAAGATTGAAGATCAAGAGTTTAAGGCAATTGGAGCTTCTTGCAACTGAAAATGAGAGGAACAAGAAGTGTTTGCTTGATTCTGGTGTCCCAAAAGCCATGATCATGTTCATATTGGATTGTTACAAAAAGGGTATCAATCAAATTGGTGAAGGTATTGAAGAAGCTCTTAGTTTGTTACAATTTGTTAAGGTTTCTTCCGAGGATGTTAAGATTCTTATGTCCGAGAATGTTTTTGATTTGGTGTTGGATTCTCTAACATGGCTTCTGGGGTGCGATTTTTCGGAGAATTCGGCGACTGTAAAATCACAAGCTGTTCTAGTGATCAAGAACTTGATCCAAAGGGGTGATTCAAGTGTTATTCAGAGGCTTAAATTTGAGTTCTTTGAGAAGATTGTGAAGGTTTTGAGAAATGGTGTTGTAACACAACAAGGTATTAGCGGCGCTTTGAAAGTGTTGCTAAGTGCTTGTGCGTATGGAAGAAACAGGATCATGATGGTGGAATGTGGTGCAGTTTTTGAGATGATTGAGATTGAAATGAGAACACCTGAGAAGATAATCACTGAATTAACAATGTCTATTCTGTTTCATCTATGTTCATGTGCTAGTGGAAGAGCTCAATTCTTGTGTCACAAAGGTTCAATGGCGGTTTTGACTGAAAGGATTTTGAAGGTTTCAGCGGCGGTTGATGATAGAGCTATAATTATTCTATCATTGATATCCAAATTCTCTGCTACAAATTTGGTGCTTCAAGAGATGTTGAAGGTTGGAACTGTTGCAAAGCTTTGTCTGGTTCTTCAGAGTGATCATGCAAAGTACATCAAAGAAAAAGCAATGGAAATTATTAAGAATCATTCTGAGAGGGAGAGTGACGCGGAAGGTTTTGCAGTTTTTGGCATAGCTTTCTCGCCGAAACTACCACTTTTGCTGGGCTGCGACGCTTGCGTTCAAAAATCCAGCTATTCCGGTCCTTCCAGACCATCCAAAGAGTTATCGCAACCTGTTGCAGCAAAGATTCGCCTCTTGTTCTGCCATTCATTTGAACTGCCATCAACCAGCTGA 1386 0.3961 MDNEIEVPQYFICPISLQIMKDPVIAITGITYDRESIEKWLFKNKNTTCPVTKMPLPNDSDLTPNHTLRRLIQAWCTQNSSLGIDRIPTPKPPLNKVQVLKLLKDLKDPRLKIKSLRQLELLATENERNKKCLLDSGVPKAMIMFILDCYKKGINQIGEGIEEALSLLQFVKVSSEDVKILMSENVFDLVLDSLTWLLGCDFSENSATVKSQAVLVIKNLIQRGDSSVIQRLKFEFFEKIVKVLRNGVVTQQGISGALKVLLSACAYGRNRIMMVECGAVFEMIEIEMRTPEKIITELTMSILFHLCSCASGRAQFLCHKGSMAVLTERILKVSAAVDDRAIIILSLISKFSATNLVLQEMLKVGTVAKLCLVLQSDHAKYIKEKAMEIIKNHSERESDAEGFAVFGIAFSPKLPLLLGCDACVQKSSYSGPSRPSKELSQPVAAKIRLLFCHSFELPSTS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02644 461 Gene3D - 96 412 IPR011989 -
Adu02g02644 461 CDD RING-Ubox_PUB 11 53 IPR045210 -
Adu02g02644 461 PANTHER WDSAM1 PROTEIN 4 397 IPR045185 GO:0061630
Adu02g02644 461 SUPERFAMILY RING/U-box 5 85 - -
Adu02g02644 461 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 83 IPR013083 -
Adu02g02644 461 Pfam U-box domain 7 80 IPR003613 GO:0004842|GO:0016567
Adu02g02644 461 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB24 4 397 - -
Adu02g02644 461 SMART Ubox_2 10 75 IPR003613 GO:0004842|GO:0016567
Adu02g02644 461 ProSiteProfiles U-box domain profile. 6 82 IPR003613 GO:0004842|GO:0016567
Adu02g02644 461 SUPERFAMILY ARM repeat 99 394 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02644 Adu-Chr2 92205732 92208157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02644 2 393 U-box Gene Family AT3G11840 42.166 1.04e-109 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02644 - - lja:Lj0g3v0014579.1 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02644 02 92205732 92208157 Adu02g02644 02 92205732 92208157 ECH