Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02638 ATGAACGACCTATTTTCCGGTTCCTTCTCCCGCTTGCGCAACGAACGTACTTCACCGGACCGCCACCACGTCATCGAGATGTCTGCCGTCACGCCGGACGCTGCAGGCTCGGGCGGCGTCCACCTCGACAAGTTCTTCGACGATGTCGAAGGCGTTAAAGAGGAGCTTCGCGAAGTCGAGCGTCNNNNNNNCGAGCGTCTTCTCCAGAGTCTCCAGAGCAGCCACGAGCAGAGCAAGACGCTTCACAACGCCGCCGCCGTGCGTGACCTCCGGTCGAGAATGGACGCCGACGTATCGGCGGCGCTGAAGAAGGCGAAGGTGATCAAGCTCCGCCTCGAGGCGCTGGACCGGTCCAACGCTGCGAACCGGAACCTGCCGGGTTGCGGACCGGGTTCGTCATCGGACCGGACGAGAACTTCGGTGGTTAACGGTTTGAAGAAGAAGCTGAAGGATTCGATGGAGAGCTTCAATGAATTGCGGCAACAGATCTCGGCGGAGTATAGGGAGACGGTGCAGCGGCGGTACTTCACCGTCACCGGCGAGAATCCCGATGAGAAGACGCTCGATCTCTTGATCTCTACTGGTGAGAGTGAGACATTCCTTCAGAAAGCCATTCAAGAACAAGGCAGGGGAAGAATTCTTGACACCATCAATGAAATTCAAGAAAGGCATGATGCTGTCAAAGAGATCGAGAAGAATCTCAAGGAGTTGCACCAGGTGTTCCTTGACATGGCAGTGCTGGTGCAAACACAGGGCGAGCAACTGGACGATATTGAGAGCCACGTGGCGCGAGCCCATTCGTTTGTGCACACTGGAACAGAGCAGTTGCAAACTGCAAGAAAGCACCAGAAGAACACCAGGAAATGGACCTGTTTTTGTATCATACTGCTTCTAGCGATTATCTTGGTAGTGTTGCTAGTGGTTCTGAAACCGTGGCAACATAATGGCAGCAGTGGTGGTGGTAGTCAGCCTGCTCCGGCTCAAACACCTCCACCACCACCTCCTGCCGGTGCTTAA 1017 0.5506 MNDLFSGSFSRLRNERTSPDRHHVIEMSAVTPDAAGSGGVHLDKFFDDVEGVKEELREVERXXXERLLQSLQSSHEQSKTLHNAAAVRDLRSRMDADVSAALKKAKVIKLRLEALDRSNAANRNLPGCGPGSSSDRTRTSVVNGLKKKLKDSMESFNELRQQISAEYRETVQRRYFTVTGENPDEKTLDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKEIEKNLKELHQVFLDMAVLVQTQGEQLDDIESHVARAHSFVHTGTEQLQTARKHQKNTRKWTCFCIILLLAIILVVLLVVLKPWQHNGSSGGGSQPAPAQTPPPPPPAGA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02638 338 PANTHER SYNTAXIN 7 317 IPR045242 -
Adu02g02638 338 CDD SynN 42 204 IPR006011 GO:0016020
Adu02g02638 338 SUPERFAMILY t-snare proteins 40 272 IPR010989 GO:0016020|GO:0016192
Adu02g02638 338 MobiDBLite consensus disorder prediction 316 338 - -
Adu02g02638 338 Gene3D - 214 310 - -
Adu02g02638 338 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 217 279 IPR000727 -
Adu02g02638 338 Coils Coil 42 61 - -
Adu02g02638 338 Pfam SNARE domain 253 305 IPR000727 -
Adu02g02638 338 Coils Coil 65 69 - -
Adu02g02638 338 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 7 317 - -
Adu02g02638 338 Coils Coil 142 166 - -
Adu02g02638 338 CDD SNARE_syntaxin1-like 216 278 - -
Adu02g02638 338 ProSitePatterns Syntaxin / epimorphin family signature. 223 262 IPR006012 GO:0005484|GO:0006886|GO:0016020
Adu02g02638 338 SMART tSNARE_6 212 279 IPR000727 -
Adu02g02638 338 SMART SynN_4 37 168 IPR006011 GO:0016020
Adu02g02638 338 Coils Coil 217 237 - -
Adu02g02638 338 Gene3D - 40 177 - -
Adu02g02638 338 Pfam Syntaxin 44 252 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02638 Adu-Chr2 92088907 92090908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02638 34 336 SNARE and Associated Proteins AT3G11820 72.756 6.84e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02638 K08486 - gmx:100809258 474.167