Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02637 ATGAATGACTTGTTCTCCGGCTCCTTCTCCCGCTTCCGCAGCACCGATCAAGTCTCTCCGGACAACCAACACCATGTCATCGAGATGGGGGCGACCGACGGCAACGTCCACCTTGACAAGTTCTTCGAGGAAGTGGAGGTTGTAAAGGAGGAGCTGAAGGAGTTGGAGAAGCTCCATGAGAGCCTAAGAGTGTCCCATGAAAGGAGCAAGACCCTTCACAGTACTAGAGCTGTGAAAGATCTTAGAGCCAGCATGGATGCTGACGTGGCAATAGCACTAAAAAAAGCCAAGCTTGTCAAGGTCCGACTCGAGGCACTAGACAGGTCCAATGCAGCAAGCCGTAGCTTGCCTGGTGCTGGACCTGGGTCTTCCTCGGATCGGACCAGGACATCCGTGGTGAGTGGATTGAGGAAGAAGTTGAAAGATTCCATGGACAGCTTCAACAACCTTAGACAACAAATATCTTCAGAGTACAGAGAGACCGTACAACGTAGATACTATACTGTCACTGGAGAGAATCCTGATGAAAAAACCGTTGATCTTCTCATCTCTACTGGTGAGAGTGAAACCTTTTTGCAAAAAGCAATTCAGCAACAGGGGAGAGCAACAATCATGGACACAATCCAAGAGATTCAAGAGAGGCATGACACAGTTATGGAGATAGAGAGGAGCCTCAATGAGCTTCACCAAGTGTTCTTGGACATGGCTGTTTTGGTCCAATCACAAGGTGAGCAAATAGATGACATAGAGAACCACGTGGCGAGAGCTAATTCGTATGTCCGCGGCGGGGTCCAGCAACTCCAGGTTGCAAGGAAGCACCAGAAGAATACCCGGAAGTGGACCTTAATTGCCATCATAATATTAATCATTATCATATTGATTATAGTTCTTCCTATTGTTTTAAAAAATTGA 912 0.4726 MNDLFSGSFSRFRSTDQVSPDNQHHVIEMGATDGNVHLDKFFEEVEVVKEELKELEKLHESLRVSHERSKTLHSTRAVKDLRASMDADVAIALKKAKLVKVRLEALDRSNAASRSLPGAGPGSSSDRTRTSVVSGLRKKLKDSMDSFNNLRQQISSEYRETVQRRYYTVTGENPDEKTVDLLISTGESETFLQKAIQQQGRATIMDTIQEIQERHDTVMEIERSLNELHQVFLDMAVLVQSQGEQIDDIENHVARANSYVRGGVQQLQVARKHQKNTRKWTLIAIIILIIIILIIVLPIVLKN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02637 303 Pfam SNARE domain 244 296 IPR000727 -
Adu02g02637 303 SMART SynN_4 33 159 IPR006011 GO:0016020
Adu02g02637 303 CDD SynN 38 195 IPR006011 GO:0016020
Adu02g02637 303 SMART tSNARE_6 203 270 IPR000727 -
Adu02g02637 303 ProSitePatterns Syntaxin / epimorphin family signature. 214 253 IPR006012 GO:0005484|GO:0006886|GO:0016020
Adu02g02637 303 SUPERFAMILY t-snare proteins 37 263 IPR010989 GO:0016020|GO:0016192
Adu02g02637 303 Pfam Syntaxin 40 243 IPR006011 GO:0016020
Adu02g02637 303 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 17 298 - -
Adu02g02637 303 Gene3D - 197 301 - -
Adu02g02637 303 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 208 270 IPR000727 -
Adu02g02637 303 PANTHER SYNTAXIN 17 298 IPR045242 -
Adu02g02637 303 MobiDBLite consensus disorder prediction 116 131 - -
Adu02g02637 303 Coils Coil 38 65 - -
Adu02g02637 303 Gene3D - 35 168 - -
Adu02g02637 303 MobiDBLite consensus disorder prediction 112 132 - -
Adu02g02637 303 CDD SNARE_syntaxin1-like 207 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02637 Adu-Chr2 92084860 92086934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02637 30 282 SNARE and Associated Proteins AT3G11820 73.913 4.23e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02637 K08486 - gmx:100808718 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02637 02 92084860 92086934 Adu02g02637 02 92084860 92086934 ECH
Adu10g02492 10 101165731 101168487 Adu02g02637 02 92084860 92086934 PCT