Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02615 ATGGGTATGGAAACTGCATATCTGAAAGAACATGAAGGAATTGTTCACAATTCTGTTGGACAGCTGTCATCAGCATCAGCAGCAGCAGGTTCTTCATGGTGGAGTATTAGTGCCTTTGGATCTCATCAAAATCAATCATCAGTTTATGGAGAGACTTCTAATTATAATAATAATAATAATAACCAAATTATGAAACCATTTTCATTGGAGCTTCATAATAATAATTACATAGACCAACTTGCTTCTTCCGCTAATAAGCAACAACAATTCTTGGATAAAGGACCTACAACACAATTTACCATCTTTCCAGAAGATTGCAAAATTTCAGGTGAATCCCAAAAGTCTCAAGCCACATTATCTTTGCAGCCATCAAATGCTGACCCTAGGAACCGTTTTGAGCTTGGATTCACTCAGCCTGTGATATGTGCAAAATATCCTTACATGGATCAATTTTATGGACTCTTCTCAGCTTATGCACCTCAAATTTCGGGGCGTATAATGCTGCCACTAAACTTGACATCAGATGATGGACCAACTTACGTGAATGCTAAGCAATACCATGGAATCATAAGGCGTAGGCAGTCACGTGCCAAAGCTGTTCTTGCCAATAAACTCATCAAACGTCGCAAGCCATATATGCATGAATCGCGCCATCTCCATGCCATGCGACGGCCAAGAGGATGTGGTGGCAGGTTCTTGAACACAAGAAATCCTGCCACCAACAATGGAAATGGCAAGAGTGGAAGTGAAACAAACAAAAAAGGACTTGGCCATCAACTACATTCTAGTGGTTCTCAGAATTCTGAAGTCCTACAATCCTCGGCCGGAACCTTGAATTCATTGAAGGAAGCAAATGGAAGCAGTCCAAACATTTCATTAGAGGTGACAAGCATGTACTCATCAAGAGGAGGAATTGATGGATTTGCCATCAATCACATTGGAACTCCTATGCACTCCCTTGCAGATATGATGGACACTGGACACGGACATGGCATGATCATGCCCCCGAAATGGGTTTCAGCTGCGGCCGGAAACTGCTGCAACCTTAATGTTTGA 1056 0.4186 MGMETAYLKEHEGIVHNSVGQLSSASAAAGSSWWSISAFGSHQNQSSVYGETSNYNNNNNNQIMKPFSLELHNNNYIDQLASSANKQQQFLDKGPTTQFTIFPEDCKISGESQKSQATLSLQPSNADPRNRFELGFTQPVICAKYPYMDQFYGLFSAYAPQISGRIMLPLNLTSDDGPTYVNAKQYHGIIRRRQSRAKAVLANKLIKRRKPYMHESRHLHAMRRPRGCGGRFLNTRNPATNNGNGKSGSETNKKGLGHQLHSSGSQNSEVLQSSAGTLNSLKEANGSSPNISLEVTSMYSSRGGIDGFAINHIGTPMHSLADMMDTGHGHGMIMPPKWVSAAAGNCCNLNV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02615 351 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 3 350 IPR001289 GO:0003700|GO:0006355
Adu02g02615 351 PRINTS CCAAT-binding transcription factor subunit B signature 178 200 IPR001289 GO:0003700|GO:0006355
Adu02g02615 351 PRINTS CCAAT-binding transcription factor subunit B signature 209 232 IPR001289 GO:0003700|GO:0006355
Adu02g02615 351 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 178 232 IPR001289 GO:0003700|GO:0006355
Adu02g02615 351 ProSiteProfiles NF-YA/HAP2 family profile. 175 235 IPR001289 GO:0003700|GO:0006355
Adu02g02615 351 MobiDBLite consensus disorder prediction 224 272 - -
Adu02g02615 351 Gene3D - 175 237 - -
Adu02g02615 351 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 3 350 - -
Adu02g02615 351 SMART cbf3 174 235 IPR001289 GO:0003700|GO:0006355
Adu02g02615 351 MobiDBLite consensus disorder prediction 234 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02615 Adu-Chr2 91914790 91920147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02615 27 349 CCAAT-HAP2 Transcription Factor Family AT3G05690 39.466 7.84e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Adu02g02615 CBFB_NFYA 7.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02615 K08064 - gmx:100527677 417.927