Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02601 ATGAACAGAAGAAGCAATCACCATAATCAAACTAGTTGCAGGGGAGGCTGCACGGCCGGCGGCGAGTGGACAGCGCGAAAGAGACTGTCCGGAGTTGGTGCGGCGCGGACGTTCGCAAAAAGGCTAGGCGGTGGAGGCTGGACGTATGAAAACGTCACATTAGACTGCACGAACGACACAATCTTCGCGACGGTGCGCACGGCAGCGTTTCCCGAAACTATATGCGATAACGGCTGTTCAAGCTGCTTCCTTGGAGGTTTTGAATTCAAGGCTTTGTTTGGTGGGTTCACAAATAATCACTACAAATTTCTTAAGACCCTTTTTTTCTCTTTTGTGGAGCTTTACCAATTCTCAATGGAGGTTCCAGAGATGGAAGGAAAGATTGAAAGCCATACAACATCAGCAGAAGCCTTTGTTGAAGGGGGGATTCAAGAAGCCTGTCATGATGCTTGCAGTATATGCCTTGAGGATTTTTGCGACAGTGATCCTGCGTCGGTGACTAATTGCAAGCATGAGTTCCATCTACACTGCATTCTTGAATGGTGTCAAAGAAGCTCCCAATGTCCCATGTGTTGGCAATCTGTTAGCTTGAAGGATGCTACCAGTCAAGAATTGCTTGAAGCAGTAGAGCAGGAGAGGAGCATAAGGGTTACCCCATCAAGAAATGTTGATATCTTTCATCATCCATCCCTTGATGATCCAGAATTGCACCAGCACATCATAATATGTTTTCACATTATGCAGTTTGAAGAGCGAATAATTCAACATATAGCTGCTGCGGCAGCAATGAGGAGAGCACGGCACCTTGGTCACAGGGAAGGTCCTAGTACTCGGTCATCTTCTCATGGCCATCCACATTTCTTACTATTCTCGGCACAGTCGAGTGCACATCCATCTAGTCCTGAATCTGTTGCCGGAGATGGAAATGAACTGGCTGAAATCCCTGTAGGAAGTCCATCTACGCCACTTACATCTGATGGAGACGAGCCATCAACGTCTCAGCTGATCGCACATATTCAAACTCGGAGCCCTTCTTTAGCTCACAGGTCTACTGTCTCGGCTACAAACCGTGAAGGGATTCAGCCTAATGAAAGGTACTTAGTTAGTTCTACCACTCATTCTTCGACTTTGGACGGAGACAGAGCAGGGCCGTCCGATCTCCAGTCATTTTCTGATTCTTTGAGGTCCAAATTTAATGCAATGTCCCTGAGATACAAAGAATCGCTTTCGAAGGGCACAAGGGGATGGAAAGAGAGGCTGTTCTCTCGAAATTCTTCTGTGTCAGAACTCGGTTCAGAAGTCAAGAGAGAGTTGAATGCTGGAATTGCGAGTGTATCCCGATTGATGGAGCGCCTCGAATCTAGAGAAAATAATAGAGTTGGGGATGCATCTTTGTCGAATCATTTGGCGGATTCCTCCATCCCTGAGACAAGCAACCAGCACAATATTCAAACTAAGCTTTGTTTTTGTTTCTGTGAATGCATACTCCTCAGCATCTCATATTTGAAGGCTAATTGTTTGCCCAGAAATGACATGCTGAGGAGATTATGCCTTTATTATGTTCTGAAACTGGTGTCCTTATATAAAGTACTTTTGGTACAATGGAACCCAATGGAAATAGATGTGGATCAAGGTTCCACTGATCCACCCACCGCCACTCGCCACCGTCCACCGTCAAGTCTCTGCCGGAATACTACCTTTTAA 1704 0.4613 MNRRSNHHNQTSCRGGCTAGGEWTARKRLSGVGAARTFAKRLGGGGWTYENVTLDCTNDTIFATVRTAAFPETICDNGCSSCFLGGFEFKALFGGFTNNHYKFLKTLFFSFVELYQFSMEVPEMEGKIESHTTSAEAFVEGGIQEACHDACSICLEDFCDSDPASVTNCKHEFHLHCILEWCQRSSQCPMCWQSVSLKDATSQELLEAVEQERSIRVTPSRNVDIFHHPSLDDPELHQHIIICFHIMQFEERIIQHIAAAAAMRRARHLGHREGPSTRSSSHGHPHFLLFSAQSSAHPSSPESVAGDGNELAEIPVGSPSTPLTSDGDEPSTSQLIAHIQTRSPSLAHRSTVSATNREGIQPNERYLVSSTTHSSTLDGDRAGPSDLQSFSDSLRSKFNAMSLRYKESLSKGTRGWKERLFSRNSSVSELGSEVKRELNAGIASVSRLMERLESRENNRVGDASLSNHLADSSIPETSNQHNIQTKLCFCFCECILLSISYLKANCLPRNDMLRRLCLYYVLKLVSLYKVLLVQWNPMEIDVDQGSTDPPTATRHRPPSSLCRNTTF 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02601 567 Coils Coil 435 455 - -
Adu02g02601 567 MobiDBLite consensus disorder prediction 543 567 - -
Adu02g02601 567 MobiDBLite consensus disorder prediction 546 567 - -
Adu02g02601 567 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 115 484 - -
Adu02g02601 567 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 115 484 - -
Adu02g02601 567 Pfam Ring finger domain 150 191 IPR001841 -
Adu02g02601 567 MobiDBLite consensus disorder prediction 318 363 - -
Adu02g02601 567 MobiDBLite consensus disorder prediction 369 388 - -
Adu02g02601 567 SMART ring_2 151 191 IPR001841 -
Adu02g02601 567 ProSiteProfiles Zinc finger RING-type profile. 151 191 IPR001841 -
Adu02g02601 567 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 230 IPR013083 -
Adu02g02601 567 SUPERFAMILY RING/U-box 145 198 - -
Adu02g02601 567 MobiDBLite consensus disorder prediction 294 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02601 Adu-Chr2 91801505 91813474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02601 148 199 C3H Transcription Factor Family AT4G00335 48.077 1.62e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02601 K19043 - gmx:100803582 489.96