Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02556 ATGCAGGATCTTTCCAACGCAGCCGCCCTCTCATCTACGTTCGATAGCGCCGCCCTCTCATCTGCACACAACACAGCCGGTGTTCACTCCTTCAGAATGGCAGAATCGCAAGAAGAACGTGCTGCAAGTGAGGGTCCTCCTTTATGCACATCACCTAGCCGAAATTTATTAATGGAGGTTGATATAGTTGAACCGTTAGTTTGTGTTGCCTCTGAAGTTTCTGAAAATTTATCAAACGAACAAGAAAACTTAGCCGCCAATGTCGCAGAGCATGGTCACAAGTTAAACAAGTTGTCGGATGTTATGGATGTTGGAAGTGAAGAGATGGAGCCTGGTGATGAGTTACCAGATCATGGTAACCTACAAGAAGATGAGATACCAAGAGTTGGAATGCGATTTCCTCAGCTGCAGATGGCGCATGACTTTTATGTGTCCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCATTAACCAGGCTATACACTGTAATCGCGATGGGATCCGCGAGTCTCGTGTTAAAGCACCAACACGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTCTGCTCAAGGCTGACTTGACGcactctcacccttgttcaccgaaaaaggcagtgcactatcatgagtataggcagttgaccatgcatgcgaaGCATGGATTACCGTTTGTGTCGTTCGTTGGGGTCAACCACCATGGTAAGTCAACCATCCTCGGTTGTGCTTTGCTGGGGAATGAGGAAATCCAAGTTATGAGTGGGTTTTCAGCCAATGGAGTTTCTGCAGTTGATGAACAGGGTCCAGTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTACTCAACGATACTATTCTATGCGTTCCGTATGATGTTCACTTTGACCGTTCCACACATGAGCTTCGTTGTGAATGCAATCTTTTTGAGAGTTCAGATGAGAGTCATGTTGCATTTAGGAAACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGCATTGCTGCATGTTGCTTTGGGAGAAACAAGGGCTAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGCATGGCAGAGACTCAGACCAACATTGGCTCTCAGAGTTCGAATGATGTCGGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAGGGTAGGCCAAAAAGTAAGAGGCTTGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACATCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGATGTTTCTAGCCTGGATGTTCCCAAACAAGACGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAACCAAAAATGGGATTAG 1467 0.4356 MQDLSNAAALSSTFDSAALSSAHNTAGVHSFRMAESQEERAASEGPPLCTSPSRNLLMEVDIVEPLVCVASEVSENLSNEQENLAANVAEHGHKLNKLSDVMDVGSEEMEPGDELPDHGNLQEDEIPRVGMRFPQLQMAHDFYVSYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKDVQDWVLLKADLTHSHPCSPKKAVHYHEYRQLTMHAKHGLPFVSFVGVNHHGKSTILGCALLGNEEIQVMSGFSANGVSAVDEQGPVVCVKVEEEKLLNDTILCVPYDVHFDRSTHELRCECNLFESSDESHVAFRKLCAHFYNVAQEFLGDDEETALLHVALGETRAKLATHRAKKRSESMAETQTNIGSQSSNDVGVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSHPVVRPHTFQDINHCDVSSLDVPKQDGGFMSLLSSFNQKWD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02556 488 MobiDBLite consensus disorder prediction 391 409 - -
Adu02g02556 488 MobiDBLite consensus disorder prediction 32 53 - -
Adu02g02556 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 246 275 IPR031052 GO:0006355
Adu02g02556 488 PANTHER OS03G0843700 PROTEIN 110 237 - -
Adu02g02556 488 PANTHER OS03G0843700 PROTEIN 246 275 - -
Adu02g02556 488 MobiDBLite consensus disorder prediction 381 456 - -
Adu02g02556 488 Pfam FAR1 DNA-binding domain 141 228 IPR004330 -
Adu02g02556 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 110 237 IPR031052 GO:0006355
Adu02g02556 488 ProSiteProfiles Zinc finger SWIM-type profile. 316 359 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02556 Adu-Chr2 91325905 91329641 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu02g02556 FAR1 5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02556 - - ahf:112733025 380.178