Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02543 ATGGCTGCCGAACTTGTGGGTGGAGCTGTTCTGTCTTCTATTCTTAATGTTGTTTTTGACAGGATGTCCTCACCAGAAGTTGCTAACTGGATCAAAGGGAAGAAGCTTACCCAGAAGCTGCTTGGAAGGTTGAAGACTACTCTTTATGCTGTTCAAGCCTTTCTCATTGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGGACTGGCTCGATACTCTCAAAGATGCTATGTATGTTGCTGATGACTTGCTGGATGAAGTCTTCACCAAAGCTGCCACTCAAAAGGATCCAGGTACCTTCTTCTCTCGTTATCTCAATTTGCAAGATAGGGAGATAGCAAACTGCATGGAGGAAATTATTGATAAGATAGAATCTATTGTGAAACAAAAAGACACTCTTGGTCTTAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATTACAACATCTCTAGTTGAAAGATCCAATATATATGGCAGGGAAAAAGACAAGGAGGTCATAGTGAAATTGTTGCTGGACGACGATGATACTACTGATGGTGATATACCTGTGATTCCCATTGTGGGCATGGGAGGAATAGGAAAGACTACTTTGGCCCAATTGGTGTACCATGATGACGAAGTGAAGAAGAATTTTGATTTTCAAGCTTGGGTTTGTGTGTCCGAAGAGTTTGATGTTATCAAGATCACCAAGACTATAATTGAAACAATAACTTCACGATCTTGTAAGTTGACAGATTTGAATTTACTTCAACATGATTTAAAGGAAAAGCTGGCCAGACGAAAATTCTTTGTTGTCTTGGATGATGCATGGAATGAAGATTATGACGCTTGGAATAGCCTTCTAAAACCTTTTCAGAATGGAGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAAGGTCGCTTCTGTAGTGCAAACTGTTCCACCTCATGAACTAAGTTTATTGTCTCATGAAGATTGTTGGTTAGTGTTTTCAAAGCATGCACGTCTTTCCACTGACTCTATGCAGAATACAACTTTGGGAAAGGTTGGCAGAAATATTGTAAAGAAGTGTAATGGATTGCCATTGGCAGCTCAAGCCCTTGGAAGCTTATTGCGTGGGAATTCTGATGTCAAGTACTGGAATCATATATTGAAGAGTGAGATATGGGAATTCTCTGATGACAGGATAAAAGTTGTACCGGCATTAAGAATTAGCTACTATTATCTTCCTTCATGCTTGAAAGAGTGCTTTGTTTATTGTTCCTTGTATCCCAAAGACCATGAATTCGACAAAGATGAATTGATTTTGTTATGGATGGCAGAAAATTTTTTACAACCAGTAGGAAAAAAAAGTATGGAAGAAGTTGGCGATGAATATTTTGATGAATTAGTTGCGAGATCATTTTTCCAGCCTCATAGTACTCGGGAAAAGATATTTGTGATGCATGATCTGGTGCATGATTTGGCAATGATCTTTGGTGGAGAGTTCTATTTTAGAGCTGAGGAGGTTGAGAATACTGTTGAAGTTGATATTAAAACTCGTCATTTGTCACATAATGCTAAAGGCAATTACCCAATGTCAAAACTTCTGGGAGTTTGTGACAAAGTAAAACATACAAGGACATTTCTTGAAGTTAATTTGGATTGGGGGATTCCATTCAACATGGAAAACGCACCATGCATTTTACTCTCACAATTGAAGTACTTGAGAGTTTTGTCGTTTAAATGCTTCCCTCTTGACTCACTTCCTGATTCAATAGGTGAGTTGATTCATTTGCGTTACTTGGATCTATCGAAGACCTACATTGTGACATTGCCCGAGTCATTCGGTAACCTGTACAATTTACAGACTTTGAAGCTGAATGGATGTGCAAATCTGAAAATTCTTCCAGCTGGCATGCATAATCTTGTCAATTTGCGTCACCTTGATATTACAGGGACTAGTTTGCATGAGATGCCGAAAGGCATGAGCAAATTGAAAGGTTTGCAGTTTTTAAGCAACTACATTGTTGGGAAGCATGAAGAGAACAAGATCAAAGAACTGGGAGCACTTGCAAATCTACACCAATCAATTTCCATTACCAAATTGGAGAATGTGGTCAACAGCAATGAAGCTTCGGAGGCAAGAATGTGTGATAAGGATGGCATTAACTCTTTGAGCTTGTTGTGGTCAATAGATAAAGATGAGAACACAGTAGATTCCCAAATTGAAAGAGATATACTTGACAAGTTACGACCTCACAGTAATTTGAAAGAACTACAAATCAGGGGTTACAGGGGTACAACACTTCCAGATTGGTTGGGGCATTCTTCCTACCACAACATCACCAAGGTACTTATGGGCGGTTTCCTTTCAGGTGGTTTCAGAAATTGTTGTATGCTTCCTTCACTTGGAGAGTTGCCTTCTTTGAAGCACCTAAAAATTAAAGGCTTTGAAAGGCTTGGGATTGTTGGTGCTGAATTTTACCAAAACCATGATTCTTGTGTGGAGACACCATTTCCAATGCTTGAAACTCTCTGGTTCGAATCAATGCCTTGCTGGAAGGAGTGGCGTTCATTGGAGTTCAATGCATTTCCCAGACTTAGGAAGCTTACCATATGGGGGTGTCCCATGTTGACAGGAGATTTGCCCAATCATCTACCATCTTTGAAATATCTTGATATTCGGAATTGCGAGCAGCTGAGTTCTTGCCTTCCAAGAGCTCCTGCTATTACCAAATTGTGTCTGCTTCATAGCAATAATGTGAGAATTTTAGAGCTACCTTCTTTATTGCATGAACTATTAATCAAAGGAAAGAATCTAGTGGAGGCCGTCATGCCGGCCATAACAAACACCCAACTGAGTTGCCTCACATCTTTATCTATCTCAGATTGTTCCTCCCATATATTGTTTCCATTGAGTAGTATTCCTGCATCAGTGAAAAAGTTGAGGATATCAAGTTGTAGAAACTTAGAATTCCAAATTGAAGGCCAACACGACTCGCTGCATATACTTGAAATAACTAACAGCTGTGATTCGGTTACATCCTTCTCGTTGTTGGATTCCTTTCCTAATCTAGTGTGTGCTGACATCACGGACTGTGAAAAGATGGAGTCTGTTGTGGTGTCATGCTCTCTTTCATGTCTCCGTTCATTATATATATACAACTGTGCCAGATTGAAATCCATTTCCACGCTGTGGACAGCAGCACCTCAGCTAGAGAATCTCACAATAATGGGCTGTCCAGAAATCGATTTGTCTGCTATAAGGGATCCACACTGTAGCTTGAGATCTCTTCGCATCGGCTACTTCGAGAAGCTAGTGAGCAGTGCAGCATTGATGAGTTTGCAATTTCATGGGCTTACTCATCTTACCATTGAAGGTGAATGCGAAAGAGTGAGTGTGAAGTCTCTCCCAAAGGAAGGTTGGTTGCCTGCATGCCTTGAGTCTCTGATACTGAATCGCATTAAAAGTGTGGAGACGTTGGAATGCAAGGGACTAGTCCACCTCAACTCCCTCCGAAGTTTAACCATTATTGAATGTCCCAAGCTGGAGAATATTGAGGGAGAAAAGCTACCTGCCTCTCTAATTCGACTCATCATCAAAGAAAGCCATTTGCTTGGTAAGAGGTGTGAGATGAAGGACCTACAGGTTTGGCCTAAAATTTCCCACATCCGCGGCATTCAAGTTAATGGAAGATGGATTTGGATGGATACTGGCATAAAGCATGCTAACATTGTCAAGGTTATAGGTCGCACTGGGTCAAGAGGGCAAGTGACCCAGGTTAGAGTCAAGTTTCTGGATGATCAGAACCGCCACATCATGAGGAATGTGAAGGGACCAATGAGAGAAGGTGACATTCTCACCCTACTCGAGTCTCAGAGAGAAGCAAGAAGTTTCCTCTTATCTTATCACTTGATCTTGAGAAACATGGCTGCTGCACTTTTGGGTGGAGCAGTTCTGTCTTCCATTCTGAATGTTGTTTTTGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGGACTGGCTCCATAGTCTCAAAGATGCTATGTATCTTGCTGATGACTTGTTGGATGAAGTCTTCACTAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCTTCTCTCGTTGTCTCAGTTTGCAAAATAGGGAGATAGCAAATAGGATGGAGGAAATCATTGATAGGATAGAGTCTATTGTGAAGCAAAAAGACACTCTTGGTCTCAGAGAAATTCCTAAGGAGAACATGTCATGGAGGGTTACAACATCTCTAGTTGATAGATCTAATGTATATGGCAGGGAAGATGACAAGGCGGCCATAGTGAACATTTTGTTGGATGATGATGACACTGGTGATGATGATATATCTGTGATTCCTATTGTGGGCATGCGTGGAATAAGAAAGACTGCTTTGGCCCAATTGGTTTACCATGATGATAGAGTGAAGGAGGATTTTGATTTTAGAGGTTGGGTTTGTGTGTCAGAAGGGTTTGATGTCATGAAGGTCACCAAGAATATACTTGATGCAATTACAAAGAGTCTTTGTAACTTGAAAATTTTGAATTTACTCCTACAAGGTTTACAGGAAAAGTTGTTGGGGCAAAGATTCTTTATCGTCTTGGATGATGTATGGAACGAGGATTATTACGATTTGAACATGCTTCTAAAACCTTTTCAACTTGAGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAAGGTGGCTTCAGTGGTGCAAACTGTTTCACCTCATGAACTAAATTTATTGTCTGATGAAGATTGTTGGTTAGTGTTTTCAAAACATGCAAGTCTTTTCACGGACTCTGTTCAGACTTCAACTTTGGAAAAGGTCGGTAGAAAGATTGTAAAGAAGTGTAACGGATTGTCTTTGGCAACTCAATCTCTTGGAGGTTTATTGCGTGGAAATTCTAATGTCAAAGATTGGAATCATATATTGAAGAGTGAGATATGGGAATTCTTTGATGACAGGATAAATATTGACCATGAATTTGACAAAGACTTGTTTGTTGGGAAGCGTGAAGAGAACAAGATTACAGAATTGGGAGCACTTGCAAATCTACACAAATCAAGGATGTTCGATAAGAATGGCATTAACTCTTTAAAGTTGAAGTGGGAGCTTATCATAAGGAACTGTCCCATGTTGAGAGGAGACTTGCCTAATCATCTACCATCTTTGCAATCACTTAAGATTATCAAATGCAGTAATCTGAGTTCCTGTCTTCCAAGCGTTCCTACTATGACTTTACACATAGTTGGTGGTAATGAAGTGAGAATTGGGGAGCTACCTCCTTTACTGCGTCAACTATCAATTAAAGGAAAGCATCAAGTGGAGTTTGTGGCTGAGGCCATTGCGAACATGCAACTGACTTGA 5379 0.4032 MAAELVGGAVLSSILNVVFDRMSSPEVANWIKGKKLTQKLLGRLKTTLYAVQAFLIDAEQKQIKERAVKDWLDTLKDAMYVADDLLDEVFTKAATQKDPGTFFSRYLNLQDREIANCMEEIIDKIESIVKQKDTLGLREIPKENMSWRITTSLVERSNIYGREKDKEVIVKLLLDDDDTTDGDIPVIPIVGMGGIGKTTLAQLVYHDDEVKKNFDFQAWVCVSEEFDVIKITKTIIETITSRSCKLTDLNLLQHDLKEKLARRKFFVVLDDAWNEDYDAWNSLLKPFQNGVKGSKILITTRSKKVASVVQTVPPHELSLLSHEDCWLVFSKHARLSTDSMQNTTLGKVGRNIVKKCNGLPLAAQALGSLLRGNSDVKYWNHILKSEIWEFSDDRIKVVPALRISYYYLPSCLKECFVYCSLYPKDHEFDKDELILLWMAENFLQPVGKKSMEEVGDEYFDELVARSFFQPHSTREKIFVMHDLVHDLAMIFGGEFYFRAEEVENTVEVDIKTRHLSHNAKGNYPMSKLLGVCDKVKHTRTFLEVNLDWGIPFNMENAPCILLSQLKYLRVLSFKCFPLDSLPDSIGELIHLRYLDLSKTYIVTLPESFGNLYNLQTLKLNGCANLKILPAGMHNLVNLRHLDITGTSLHEMPKGMSKLKGLQFLSNYIVGKHEENKIKELGALANLHQSISITKLENVVNSNEASEARMCDKDGINSLSLLWSIDKDENTVDSQIERDILDKLRPHSNLKELQIRGYRGTTLPDWLGHSSYHNITKVLMGGFLSGGFRNCCMLPSLGELPSLKHLKIKGFERLGIVGAEFYQNHDSCVETPFPMLETLWFESMPCWKEWRSLEFNAFPRLRKLTIWGCPMLTGDLPNHLPSLKYLDIRNCEQLSSCLPRAPAITKLCLLHSNNVRILELPSLLHELLIKGKNLVEAVMPAITNTQLSCLTSLSISDCSSHILFPLSSIPASVKKLRISSCRNLEFQIEGQHDSLHILEITNSCDSVTSFSLLDSFPNLVCADITDCEKMESVVVSCSLSCLRSLYIYNCARLKSISTLWTAAPQLENLTIMGCPEIDLSAIRDPHCSLRSLRIGYFEKLVSSAALMSLQFHGLTHLTIEGECERVSVKSLPKEGWLPACLESLILNRIKSVETLECKGLVHLNSLRSLTIIECPKLENIEGEKLPASLIRLIIKESHLLGKRCEMKDLQVWPKISHIRGIQVNGRWIWMDTGIKHANIVKVIGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPMREGDILTLLESQREARSFLLSYHLILRNMAAALLGGAVLSSILNVVFDAEQKQIKERAVKDWLHSLKDAMYLADDLLDEVFTKAATQKDPGTFFSRCLSLQNREIANRMEEIIDRIESIVKQKDTLGLREIPKENMSWRVTTSLVDRSNVYGREDDKAAIVNILLDDDDTGDDDISVIPIVGMRGIRKTALAQLVYHDDRVKEDFDFRGWVCVSEGFDVMKVTKNILDAITKSLCNLKILNLLLQGLQEKLLGQRFFIVLDDVWNEDYYDLNMLLKPFQLEVKGSKILITTRSKKVASVVQTVSPHELNLLSDEDCWLVFSKHASLFTDSVQTSTLEKVGRKIVKKCNGLSLATQSLGGLLRGNSNVKDWNHILKSEIWEFFDDRINIDHEFDKDLFVGKREENKITELGALANLHKSRMFDKNGINSLKLKWELIIRNCPMLRGDLPNHLPSLQSLKIIKCSNLSSCLPSVPTMTLHIVGGNEVRIGELPPLLRQLSIKGKHQVEFVAEAIANMQLT 1792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02543 1792 Gene3D Ribonuclease Inhibitor 545 930 IPR032675 -
Adu02g02543 1792 SUPERFAMILY Nucleic acid-binding proteins 1230 1292 IPR012340 -
Adu02g02543 1792 CDD S1_S28E 1234 1290 IPR000289 GO:0003735|GO:0005840|GO:0006412
Adu02g02543 1792 Gene3D - 319 403 IPR042197 -
Adu02g02543 1792 Gene3D - 1584 1663 IPR042197 -
Adu02g02543 1792 Gene3D Ribonuclease Inhibitor 945 1223 IPR032675 -
Adu02g02543 1792 Gene3D - 1228 1292 IPR012340 -
Adu02g02543 1792 Hamap 30S ribosomal protein S28e [rps28e]. 1229 1293 IPR000289 GO:0003735|GO:0005840|GO:0006412
Adu02g02543 1792 Gene3D - 27 136 - -
Adu02g02543 1792 Gene3D - 1311 1398 - -
Adu02g02543 1792 PANTHER DISEASE RESISTANCE PROTEIN RP 32 961 IPR044974 GO:0006952
Adu02g02543 1792 PANTHER DISEASE RESISTANCE PROTEIN RP 1322 1648 IPR044974 GO:0006952
Adu02g02543 1792 CDD RX-CC_like 41 128 IPR038005 -
Adu02g02543 1792 Pfam Rx N-terminal domain 1313 1364 IPR041118 -
Adu02g02543 1792 Pfam Rx N-terminal domain 10 99 IPR041118 -
Adu02g02543 1792 Gene3D - 404 489 IPR036388 -
Adu02g02543 1792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 419 IPR027417 -
Adu02g02543 1792 PANTHER OS05G0414200 PROTEIN 1322 1648 - -
Adu02g02543 1792 SUPERFAMILY L domain-like 836 1203 - -
Adu02g02543 1792 Pfam Ribosomal protein S28e 1233 1291 IPR000289 GO:0003735|GO:0005840|GO:0006412
Adu02g02543 1792 PANTHER OS05G0414200 PROTEIN 32 961 - -
Adu02g02543 1792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1412 1661 IPR027417 -
Adu02g02543 1792 PRINTS Disease resistance protein signature 186 201 - -
Adu02g02543 1792 PRINTS Disease resistance protein signature 356 370 - -
Adu02g02543 1792 PRINTS Disease resistance protein signature 877 893 - -
Adu02g02543 1792 PRINTS Disease resistance protein signature 259 273 - -
Adu02g02543 1792 SUPERFAMILY L domain-like 479 924 - -
Adu02g02543 1792 Gene3D - 1408 1578 IPR027417 -
Adu02g02543 1792 Gene3D - 143 312 IPR027417 -
Adu02g02543 1792 Pfam NB-ARC domain 1428 1649 IPR002182 GO:0043531
Adu02g02543 1792 Pfam NB-ARC domain 163 384 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02543 Adu-Chr2 91231830 91240902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02543 1229 1290 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 80.645 5.77e-27 103