Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02527 ATGAGAACTTCTTGGGCAGATTCTGCTGACAATTCAGCCACTCGTTCTTCCAATACCCATGCGCAGTCTAACCGGGCTGCATATGTTCCGCCTCATCTTCGCAACCGGCAAATGACTTCTGAGCCTCCTGTACCATCGAATTCAGCAGCTGCTTTGCCAGCTAATGATCGGTCGAGTTATGGTGGTCCAACTGCTTCTTCTTATGGGGGAAGTTCCTTTAATAAGCCTGATTTCGGGCGGCAAGGATATGGCTCTGGTTTTCAGACCGGTGGTGGTGGTGGTGGTGCCTGGAACAACAATAGAGGAGGAGGGAGGGACCGTGGAAGGCGCGAGGCGAACCCTTTTGAGAATGACGATGCTGCGGATCAGTCAATTGGTGAGCAGGAAAACACAGGGATTAACTTTGATGCTTATGATGATATCCCTGTGGAGACTAGTGGAGAAAATGTGCCTCCACCTGTGAATACATTTGCAGAGATTGACTTGGGAGAGACATTGAATCAGAATATAAAGCGCTGCAAGTATGTGAAGCCAACTCCGGTACAGAGGTATGCCATACCGATATCTCTTGCTGGACGAGATTTGATGGCTTGTGCTCAGACAGGGTCAGGAAAAACTGCTGCCTTTTGCTTCCCTATTATAAGTGGAATAATGAGGGAGCCATTTGTTCAAAGACCCCGTGTAGGACGAACTGCTTACCCACTGGCACTTATCCTCTCCCCTACTAGGGAGCTTTCGTGCCAGATACATGATGAGGCCAAAAAATTTTCTTACCAGACTGGTGTCAAGGTTGTAGTTGCTTATGGAGGAGCACCAATCAACCAACAGCTGCGGGAGCTTGAGAGAGGAGTTGATATTCTGGTTGCAACTCCGGGGCGATTGGTAGATTTGCTTGAGAGGGCTAGGGTATCACTGCAGATGATAAGATATTTGGCTCTCGATGAGGCAGATCGTATGCTGGATATGGGTTTTGAGCCTCAAATAAGAAAGATTGTTGAACAAATGGACATGCCTCCACCTGGCATGAGGCAGACACTGCTCTTCAGTGCAACATTTCCAAAAGAGATACAGCGACTTGCATCGGATTTTCTTTCAAGCTATGTGTTTCTGGCTGTTGGAAGGGTTGGTTCAAGTACTGACTTAATTGCTCAGAGAGTAGAATATGTGCTTGAGTCAGACAAGAGAAGCCACCTCATGGACCTTCTTCATGCTCAGAGAGAAACTGGTATTGATGGCAAGCAAGGTCTGACATTAGTTTTTGTGGAAACAAAGAAAGGAGCTGATGCACTTGAACACTGCTTGTGTGTCAATGGATTTCCTGCAACTAGCATTCATGGTGACAGAACACAACAAGAAAGAGAACTAGCATTGAGATCATTCAAGAGCGGAAACACACCAATTTTAGTGGCGACGGATGTTGCAGCTCGTGGTCTTGATATTCCAAGGGTGGCACATGTGGTAAACTTTGATCTTCCCAATGACATCGATGATTATGTGCATCGGATAGGAAGAACCGGTCGAGCTGGTAAAATGGGGTTGGCCACAGCCTTCTTCAATGAGAGTAATTTGTCCCTGGCTAAACCATTGGCTGATCTGATGCAAGAGGCGAATCAAGAAGTACCTGCTTGGCTCACACGTTATGCAGCTAAGGCTTCTTACGGCGGTGGCAACAGAAACAGGCGCACAGGTGGATCCCGTTTCGGCGGCCGCGATTTCAGGAGGGAGGGCTCGTTCAACAAAGGAACAGATTACTATGGAGGAGGAGGAACTGGTGGGCATGGGGTTCCGGGCAGTTATGGCGGAGGATATGGTCAAGGCGTGACAACACACCCTCAACGAGCTTCTCTCTCATTCCCAATTCTGAGACTCAAACTCTCTCCTCTCTCACTGCCACTAGAGTCTCTCTCCGTCTCACTAGAGTCTCTACTCGTTCACACAGTCACACTCACCGGCGTCTCGTTGCTCCTCTGCTATCGTCGCCGGCGTTTCAACGTCTCGCGGCCTTCCCTGGGCTCCTCCTCGCCGGCGACAGAAGCACTCGTCGGATCGTCGTTGCTCGTCGTCTTCTGGTTTCAAGTACTCGCCGTCGCGAGTCGCCGTGGATCGTGGACCGTCGTAGAGTCGTCACTTGCTTCGTCGCTCGTCCTCTTATGGGGTCGGGTCCTCTTCGTCACCCAGTTGCCCTTGCGCTTTGAGATAGTTAATGGTGTCACTGAAGTTGAAGGAATAGCAGAGGAGAAAACTGCAGAAAAAGGAGTACCTGCTTTTTGGCTCAATGCAATGAAAAACAATGAAGTGTTAGCTGACGAGATTTCAGAGCATGATGAAGGTGCTCTCAAGTTTTTCAAAGATATCAACAATTGGGTGAAGACCCCTTCAATGGAAATAATCAAATCCATCTCAGGCATCAAGGTTCAAGTCTGTGAAAGAAACCACCAACCCGTTGATGAGGTCACGGTGGGTACGGTTGAAATTAAGCTTCCTGAAGAAGGAGTAGGAGGCCATGAAAAGACTGACAATATTTTTTTTTTTGGTATGAACAAAATAACCTGA 2553 0.483 MRTSWADSADNSATRSSNTHAQSNRAAYVPPHLRNRQMTSEPPVPSNSAAALPANDRSSYGGPTASSYGGSSFNKPDFGRQGYGSGFQTGGGGGGAWNNNRGGGRDRGRREANPFENDDAADQSIGEQENTGINFDAYDDIPVETSGENVPPPVNTFAEIDLGETLNQNIKRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREPFVQRPRVGRTAYPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQRLASDFLSSYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRETGIDGKQGLTLVFVETKKGADALEHCLCVNGFPATSIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNESNLSLAKPLADLMQEANQEVPAWLTRYAAKASYGGGNRNRRTGGSRFGGRDFRREGSFNKGTDYYGGGGTGGHGVPGSYGGGYGQGVTTHPQRASLSFPILRLKLSPLSLPLESLSVSLESLLVHTVTLTGVSLLLCYRRRRFNVSRPSLGSSSPATEALVGSSLLVVFWFQVLAVASRRGSWTVVESSLASSLVLLWGRVLFVTQLPLRFEIVNGVTEVEGIAEEKTAEKGVPAFWLNAMKNNEVLADEISEHDEGALKFFKDINNWVKTPSMEIIKSISGIKVQVCERNHQPVDEVTVGTVEIKLPEEGVGGHEKTDNIFFFGMNKIT 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02527 850 SMART ultradead3 174 385 IPR014001 -
Adu02g02527 850 SUPERFAMILY NAP-like 730 789 IPR037231 -
Adu02g02527 850 MobiDBLite consensus disorder prediction 1 25 - -
Adu02g02527 850 CDD SF2_C_DEAD 382 518 - -
Adu02g02527 850 MobiDBLite consensus disorder prediction 39 74 - -
Adu02g02527 850 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 52B-RELATED 38 583 - -
Adu02g02527 850 CDD DEADc_DDX3_DDX4 156 376 IPR044763 GO:0003724|GO:0005524
Adu02g02527 850 Pfam Nucleosome assembly protein (NAP) 744 787 IPR002164 GO:0005634|GO:0006334
Adu02g02527 850 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 38 583 - -
Adu02g02527 850 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 397 548 IPR001650 -
Adu02g02527 850 MobiDBLite consensus disorder prediction 103 117 - -
Adu02g02527 850 Gene3D - 373 553 IPR027417 -
Adu02g02527 850 Gene3D - 111 372 IPR027417 -
Adu02g02527 850 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 155 183 IPR014014 GO:0003724
Adu02g02527 850 Pfam Helicase conserved C-terminal domain 395 509 IPR001650 -
Adu02g02527 850 Gene3D Nucleosome assembly protein 747 811 - -
Adu02g02527 850 MobiDBLite consensus disorder prediction 1 128 - -
Adu02g02527 850 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 186 370 IPR014001 -
Adu02g02527 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 524 IPR027417 -
Adu02g02527 850 SMART helicmild6 428 509 IPR001650 -
Adu02g02527 850 Pfam DEAD/DEAH box helicase 179 359 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02527 Adu-Chr2 91097866 91104635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02527 153 541 Eukaryotic Initiation Factors Gene Family AT3G19760 31.633 1.17e-59 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02527 K11594 - gmx:100818326 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02527 02 91097866 91104635 Adu02g02527 02 91097866 91104635 ECH