Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02523 ATGAACAACCTCAGAAAACAATCACCATGTTTCCCCTTTATACCAATCCTATCCATGATTTTTGCACTGATCTTTTTAGCAACACATCTCAATTATTTCATTGAAGCCCCAAATTTCAAATCAACAACACCACAAGAAGGGAAAAAACATCTCCATTTCCAAAACCATATCCAATTAGTAGCACATTCAAAATGCAAAGGAACACTCTACCCTGATCTCTGTGTCTCAACCTTATCCACATTCCCAAACCTTGAAACAAGAACAATGCCACAAATAATCTCCAAAGTAGTCAACCACACAGTCCATGAAGTCAAATCTTCATCCAACAACTGCACCACCATAATCAAGAATCTCCAAAACACTCTCAACACAATTGAGAAAAGAGCCTTAGATGATTGTCTCAAACTCTTTGATGACACCATAGTAGAACTCAACACCACCATTCTTGATCTCTCAAGAAACCCATCATCATCATCATCATCTTCCAACCAAGATTTGCAAACTCTACTAAGTGGGGCAATGACAAATTTGTACACTTGTCTTGATGGTTTCTCACAAAGCAAAAATGGGAATGCTGTGAGAGGGTTGATAGAGGAGAAAGTGATTGAGATATCACATCATGTTAGTAACTCATTGGCAATGTTGAAGAAAGTGAAGACAAGTTTGAAGAAAGAAGAAGTGTTTGCTGAATATGGAACAATGAAGAAAGGGTTCCCTTCATGGGTTTCTGCTAAGGATAGGAAGCTTCTAGAAGGTGGAAATGTGAATGAAACTAAGATTGATGTTGTTGTGGCTAAAGATGGTTCTGGAAATTTTACTACTATTGGTGAAGCTGTAGCTATGGCTCCTAATTCCAGCACAACCAGGTTTGTGATATACATAAAAAGTGGAGCATACTTGGAGAATGTGGAAGTAATTAGAAAGAAGAGTAATTTGATGTTTATTGGAGATGGCATTGGAAGGACCATTGTCAAGGCGAGTAGGAATGTTGTCGATGGCTGGACCACTTTTCAATCAGCTACTGTTGCTGTGGTAGGAGAAGGCTTCATAGCTAAGGGCATAACCTTTGAGAACTCAGCCGGGCCAGACAAGCACCAAGCCGTGGCGCTACGAAGCGGCGCCGACTTCTCCGCCTTCTACAAATGCAGCTTCGTCGGCTACCAAGACACCCTCTACGTCCACTCCATGCGCCAATTCTACCGCGACTGCGACATTTACGGCACCGTTGACTTCATATTCGGCAACGCCGCCGTACTCTTCCAAAATTGCAACCTCTACGCACGAAAACCTAACGAGAATCAAAAGAATCTTTTCACCGCACAAGGCAGAGAAGATCCGAACCAGAACACCGGAATTTCGATCTTGAATTGCAAGATCGCCGCCGCATCGGACCTAATTCCGGTCAAATCGTCGTTCAAGAGTTACTTAGGGAGGCCATGGAAACTATACTCGAGAACGGTGTACCTTAGATCTTACATGGAGGATCTGATTGATCCGAAAGGGTGGCTTGAATGGAATGAGACATTTGCATTGGACACACTTTATTATGGTGAGTATATGAATAAGGGGCCAGGTTCAAACACAAGTGGTAGAGTAAATTGGCCAGGTTTTAGGGTTATTAATAGTTCCAATGAAGCAAGCCAATTCACTGTTGGTGAGTTCATACAAGGTAGTGAATGGTTGAACAACACTGGCATTCCATTCTTCTATAATTTGAGTTGA 1722 0.4193 MNNLRKQSPCFPFIPILSMIFALIFLATHLNYFIEAPNFKSTTPQEGKKHLHFQNHIQLVAHSKCKGTLYPDLCVSTLSTFPNLETRTMPQIISKVVNHTVHEVKSSSNNCTTIIKNLQNTLNTIEKRALDDCLKLFDDTIVELNTTILDLSRNPSSSSSSSNQDLQTLLSGAMTNLYTCLDGFSQSKNGNAVRGLIEEKVIEISHHVSNSLAMLKKVKTSLKKEEVFAEYGTMKKGFPSWVSAKDRKLLEGGNVNETKIDVVVAKDGSGNFTTIGEAVAMAPNSSTTRFVIYIKSGAYLENVEVIRKKSNLMFIGDGIGRTIVKASRNVVDGWTTFQSATVAVVGEGFIAKGITFENSAGPDKHQAVALRSGADFSAFYKCSFVGYQDTLYVHSMRQFYRDCDIYGTVDFIFGNAAVLFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAASDLIPVKSSFKSYLGRPWKLYSRTVYLRSYMEDLIDPKGWLEWNETFALDTLYYGEYMNKGPGSNTSGRVNWPGFRVINSSNEASQFTVGEFIQGSEWLNNTGIPFFYNLS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02523 573 SUPERFAMILY Pectin lyase-like 259 570 IPR011050 -
Adu02g02523 573 PANTHER PECTINESTERASE 43 572 - -
Adu02g02523 573 Gene3D - 255 572 IPR012334 -
Adu02g02523 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 217 IPR006501 GO:0004857
Adu02g02523 573 CDD PMEI-like_3 65 217 - -
Adu02g02523 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 217 IPR035513 -
Adu02g02523 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 219 IPR035513 -
Adu02g02523 573 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Adu02g02523 573 PANTHER PECTINESTERASE 43 572 - -
Adu02g02523 573 Pfam Plant invertase/pectin methylesterase inhibitor 63 214 IPR006501 GO:0004857
Adu02g02523 573 Pfam Pectinesterase 261 557 IPR000070 GO:0030599|GO:0042545
Adu02g02523 573 SMART PMEI_2 56 214 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02523 Adu-Chr2 91064985 91073153 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02523 91 572 Carbohydrate Esterase AT4G02320 54.949 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02523 K01051 - gmx:100802881 840.876