Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02518 ATGTCTAAGCTTCTCAATCTCATCATTCTCTTTCTATTCCCTTTCTTCTTTGCTTCCATAGCTTCTTCAGACACACCTCCTTCAACTCCAATCACCCCAACCAATCTATGCAAATCCACACCCGATCCAAACTACTGCAAATCCGTTCTCCCTCCAACAAAAAACGCCAATGTCTATTACTATGGCCGCTTCTCAGTTAAAAGCTCCATTTCACAAGCCACGAAGTTCTTGAGCCTTGTTAACAAGTATCTTCAACGGAGCAACACGCTTTCCGTCCCCGCGATTCGAGCACTTCAAGATTGCAAGACACTGGGAGAACTGAACCTGGATTTCTTGACGAGCTCGTTTCAAACGGTGAACAAGACGACGAGGGTGTTGGGGAGTTACCAGGCTGATGATATCCAGAACCTTCTCAGTGCCATTCTTACGAACCAACAAACATGCTTGGATGGACTTCAAGAAGCTTCTTCAGCTTGGAGCGTCAAGAATGGACTCAGTGTTCCACTTTCTAATGACACTAAGCTTTATAGTGTCTCTCTTGCTCTCTTCACTAAAGGGTGGGTTCCAAAGACAAAGAACAAAGTTGGAACATCTTCATCAGTTCAAGTGACTAGGAAGCAACTTGGATTCAAAAATGGTCGCATGCCTCCAATGCAGATGTCGAGCCAAACCAGAGCAATCTACGAGTCGGTGAGCCGCCGGAACCTTCTAGAACCGGTGGTGGGGACCCAGGTGAAGGTGAACGGCATTGTAACCGTTAGCCAAGACGGCACAGGAAACTTCACCACCATCAATGATGCCTTAGCGGTTGCACCCAACAAGTCCTCGTCCACGGACGGGTACTTCTTGATCTATGTTACTGCCGGAATTTACGACGAAATCGTGTCCATTGATAAAAAGAAGACTTATTTGATGATGATTGGAGATGGAATCAACAAAACAATCATTACAGGAAATCAAAGTGTCGTTGATGGCTGGACAACCTTTAATTCCGCCACTTTTGCCGTGGTAGGCCAAGGATTTGTGGGAGTGAACTTCACCGTCCGGAACACCGCCGGTGCCGTGAAACACCAAGCAGTGGCACTCCGAAACGGCGCCGATCTATCCACATTTTATAGCTGCAGTTTTGAGGGGTACCAAGACACACTCTATGCACATTCTCTAAGACAATTTTATAGAGAATGTGACATATATGGTACCGTTGACTTTATCTTTGGTAATGCCGCATCCGTGTTCCAAAATTGTAACATATACCCTAGACTCCCAATGAGTGGACAATTCAATGCAATTACCGCCCAAGGCCGAACCGATCCAAACCAAAACACCGGAATCTCAATCCATAATTGCACAATCAAGCCGAGTGATGACTTGGCCGCGAACATTGGCGCGGCCGCGACCTACCTTGGTAGGCCGTGGAAACAATACTCTAGGACGGTTTACATGCAAACTTTCATGGACAGTGTGGTTGATTCTAAAGGATGGAAAGAATGGGATGGTGATTTTGCATTGAGTACATTGTATTATGCCGAGTACGATAACAATGGACCCGGTTCTAACACTTCCAACAGAGTCACTTGGGCTGGTTACCATGTGATTAATTCCACGGATGCATCAAATTTCACTGTCTCTAATTTCTTGCTTGGAGATGATTGGTTGCCCCAGACAGGTGTCACTTACACTAGTAGCTTGATATAG 1695 0.4584 MSKLLNLIILFLFPFFFASIASSDTPPSTPITPTNLCKSTPDPNYCKSVLPPTKNANVYYYGRFSVKSSISQATKFLSLVNKYLQRSNTLSVPAIRALQDCKTLGELNLDFLTSSFQTVNKTTRVLGSYQADDIQNLLSAILTNQQTCLDGLQEASSAWSVKNGLSVPLSNDTKLYSVSLALFTKGWVPKTKNKVGTSSSVQVTRKQLGFKNGRMPPMQMSSQTRAIYESVSRRNLLEPVVGTQVKVNGIVTVSQDGTGNFTTINDALAVAPNKSSSTDGYFLIYVTAGIYDEIVSIDKKKTYLMMIGDGINKTIITGNQSVVDGWTTFNSATFAVVGQGFVGVNFTVRNTAGAVKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAASVFQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGISIHNCTIKPSDDLAANIGAAATYLGRPWKQYSRTVYMQTFMDSVVDSKGWKEWDGDFALSTLYYAEYDNNGPGSNTSNRVTWAGYHVINSTDASNFTVSNFLLGDDWLPQTGVTYTSSLI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02518 564 SUPERFAMILY Pectin lyase-like 248 560 IPR011050 -
Adu02g02518 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 185 IPR035513 -
Adu02g02518 564 SMART PMEI_2 28 182 IPR006501 GO:0004857
Adu02g02518 564 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Adu02g02518 564 Pfam Pectinesterase 251 549 IPR000070 GO:0030599|GO:0042545
Adu02g02518 564 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 23 562 - -
Adu02g02518 564 Gene3D - 249 564 IPR012334 -
Adu02g02518 564 CDD PMEI-like_3 36 187 - -
Adu02g02518 564 Pfam Plant invertase/pectin methylesterase inhibitor 35 182 IPR006501 GO:0004857
Adu02g02518 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 185 IPR035513 -
Adu02g02518 564 PANTHER PECTINESTERASE 23 562 - -
Adu02g02518 564 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02518 Adu-Chr2 91025074 91028018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02518 10 564 Carbohydrate Esterase AT4G02330 61.821 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02518 K01051 - gmx:100800971 885.56