Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02516 ATGACATTCTGTTTCATCTTCAACACTTCACTTCCCTTTCTTCAATTCTCTCTCTCTCTCTCTCTCTTCATGTTCATGGATTCATCAGAAATCGAATCCAATTCCAAGTTATATGCCAAAAACGGCATCCTCTTCCTTACCTTCACCGTACTCCTTTTCTTCCTCCTCCTCCTCATCATTTTCCTCCACACTTTCCGACACTCATGCTTTCCTATCCGCCGCCGTAACAGCCACCGTCGTCACCACCGCCACCGACACACTGTTCCCGCCAGCAACGGTATCCACCCTTCCCTTCTTACTACCCTCCCAACCTTCACACACCCTCCTTCTTCTCCTTCCGCCGTCGGCGGCGGCGACAGCTGTGCCGTGTGCATGTCGGAGTTCGTCGCCGGCGAGGAGGGCCGTGTCCTTCCGATTTGCCGCCACGCTTTTCATTCGCAATGCATAGATGCGTGGTTCGGTTCTCACTCGAGTTGCCCGCTTTGTAGGAAACCGGTTCATCCGGTTCAACCCGGTTCGGTGGTTATTGAACCGGGTCTGGAGAAGTGGTTTCCTGAACCGATTTGGTGCCCGAAGAAGAAACCGTTGGAGATGGAGTTGGAAATGGAGAAAGTGCAGAAGATGAAGAATAGTAGTTACTGTATAAATATAATGGGTCTTTAA 663 0.5068 MTFCFIFNTSLPFLQFSLSLSLFMFMDSSEIESNSKLYAKNGILFLTFTVLLFFLLLLIIFLHTFRHSCFPIRRRNSHRRHHRHRHTVPASNGIHPSLLTTLPTFTHPPSSPSAVGGGDSCAVCMSEFVAGEEGRVLPICRHAFHSQCIDAWFGSHSSCPLCRKPVHPVQPGSVVIEPGLEKWFPEPIWCPKKKPLEMELEMEKVQKMKNSSYCINIMGL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02516 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 169 IPR013083 -
Adu02g02516 220 Pfam Ring finger domain 119 163 IPR001841 -
Adu02g02516 220 PANTHER RING-H2 FINGER PROTEIN ATL64 33 171 - -
Adu02g02516 220 SMART ring_2 121 162 IPR001841 -
Adu02g02516 220 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Adu02g02516 220 SUPERFAMILY RING/U-box 117 169 - -
Adu02g02516 220 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 33 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02516 Adu-Chr2 91005994 91006784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02516 20 164 C3H Transcription Factor Family AT1G76410 40.667 7.06e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02516 - - ahf:112728565 340.887