Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu02g02496 | ATGATCAAAATACCATCTCTTACTTTACTTCTTCAGCTTATGCTTCTGTTGTTCCTTACAAGTACCATTCAGTTGGTATTTGCAAAGGGGAAAGACAATGTTAGAGAAGCATGCAAGGTGACAAGGTATCCCAAACTTTGTTTCCGCTCGCTAGCGCAGTTCTCCAACGCTGCCGGAACGAGCCCCAGCAAATGGGCAAGGGCAGGGGTGTCAGTGACAATAGGAGAGGTTAAGCATGTTCTAGTATACCTTGCAAGGTTGAAGAAGATTCAAGGACAAGTAGGGGGAAGAAGGAGCAGAGCTGCACTCTCTGATTGCATCGAGACTTCTAGAGATGCCCTCGATGAGCTTCATAGGTCGCTTGGTGTGCTCAGGAAGCTCAGCAAAAACACCTTTGGTACCCAAATGGATGACCTTAACACATGGATCAGTGCAGCACTCACTGATCAGGATACTTGCCTAGATGGATTTCAAGGCCAAAGAGTAGGAAAGGAGATTAGGTTGCTGAAAATTAAGGTTATAAGATCATATTACATAACCAGTAATGCTTTAGCTCTTGTTAACAAGCTTGCCACTACAGGTATTGGAAGCATAGCGGATCCATAG | 606 | 0.4472 | MIKIPSLTLLLQLMLLLFLTSTIQLVFAKGKDNVREACKVTRYPKLCFRSLAQFSNAAGTSPSKWARAGVSVTIGEVKHVLVYLARLKKIQGQVGGRRSRAALSDCIETSRDALDELHRSLGVLRKLSKNTFGTQMDDLNTWISAALTDQDTCLDGFQGQRVGKEIRLLKIKVIRSYYITSNALALVNKLATTGIGSIADP | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu02g02496 | 201 | CDD | PMEI-like_3 | 37 | 192 | - | - | |
| Adu02g02496 | 201 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 29 | 192 | IPR035513 | - | |
| Adu02g02496 | 201 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 16 | 185 | - | - | |
| Adu02g02496 | 201 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 32 | 190 | IPR035513 | - | |
| Adu02g02496 | 201 | SMART | PMEI_2 | 29 | 186 | IPR006501 | GO:0004857 | |
| Adu02g02496 | 201 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 8 | 190 | IPR006501 | GO:0004857 | |
| Adu02g02496 | 201 | Pfam | Plant invertase/pectin methylesterase inhibitor | 33 | 186 | IPR006501 | GO:0004857 | |
| Adu02g02496 | 201 | PANTHER | PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN | 16 | 185 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu02g02496 | Adu-Chr2 | 90853657 | 90854678 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu02g02496 | 34 | 198 | Carbohydrate Esterase | AT3G14310 | 36.686 | 7.60e-23 | 93.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu02g02496 | - | - | adu:107492431 | 234.958 |