Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02455 ATGGCAACAAATAGATTCATATGTGAGATATGCAACAAAGGGTTTCAGAGGGACCAAAACCTTCAGTTACATAGGAGAGGTCACAATCTACCATGGAAGCTAAGGCAAAGAGCAACAACAGAAGAGGCGATGAAGAAGAGGGTGTACGTGTGCCCCGAAAAATCGTGTGTGCACCATAACCCTGCCCGAGCACTGGGGGACCTCACTGGGATAAAGAAACATTACAGCAGGAAACATGGTGAGAAGAAGTGGAAATGTGACAAGTGTTCAAAGAAATATGCTGTTCAATCTGATTGGAAGGCTCATCTGAAAACATGTGGCACTAGGGAATATAAATGTGATTGTGGAACTATATTCTCCAGAAGGGACAGCTTCATAACACACAGGGCCTTTTGTGATGCATTAACTGAGGAAAACAACAGAATAAATCAACAAGGATTAACAAATGGGGTGCCACAAAACTTGCAAAATGAACAAGTCTCTGATCTTATAGCCACAATGCCCCTAAGCAACAGTAATGCATCAGAACTCAACAGCAATAACCATAACAATCCACTTAGAACACTCTCACAAGAGATTGTACCTGTGCCATTCAAGTCCATGAGCATTGGTGGGGGCATTTTCTCCCCAACAAGTTCATCATCAGGTACACTATTTGGTGGTCCAAAGAGCATGCACCCTCTTCCTACCTCTTCTTCAAGCCTTCAACTCAGTTCCAACAACTCCACTGGTTTCAATTACTTCCAAGATAGCAGCAAGAACTTGGGTCTAGTTTCCAGCTCAGCTCACATGTCTGCAACTGCATTATTGCAGAAAGCAGCACAAATGGGTGCTGCTGCAAGCAGCAGCAGCATTAACTCCCCCATGATGCAAAAACCCTTTGTTACTACCATGGCCGGTCCTGACCAAGTTTCTGGTGCTGCTACGGCTATGCAGCACCATAACCGTAATAACCCTCCTTCCTATGATCATCACTTCAATCCACAGGCTGATCAATTTTTTCATAAAAGGCAGCAAGAAATGCCACTGATATTTGAAGCTAATAACAATAGTAATGATGGGTCAACAACAAATAATGATATAGGAATGCTTAGCACAATGTTCATGGGAAGTGATCACAATACACAAGAGGTTGGTGCTACTAGTTTGGTCCATGAAAGAGACCTTGCAGAAGGAAATAACCAAATGGGGGCACCAAGGTTTGGTGTCAGTAATGACATGAAAACAGTTCATGATTTCTTGGGAGTTGGAGGGTCAACTTCAAGAGCTACAGGGAATTTGCATGAACCTCAGAGACATCATCATCATCAACAAGAACAACAGAGATTGGAATTAGAAGCATTAAGCCAACAGAGGTTACCACTTATTAATCACTTTCAGCATCACATTCCACATGGAGATTCAACTATGGAGAAATCTGTTTGGGACATATGA 1434 0.4261 MATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRATTEEAMKKRVYVCPEKSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRINQQGLTNGVPQNLQNEQVSDLIATMPLSNSNASELNSNNHNNPLRTLSQEIVPVPFKSMSIGGGIFSPTSSSSGTLFGGPKSMHPLPTSSSSLQLSSNNSTGFNYFQDSSKNLGLVSSSAHMSATALLQKAAQMGAAASSSSINSPMMQKPFVTTMAGPDQVSGAATAMQHHNRNNPPSYDHHFNPQADQFFHKRQQEMPLIFEANNNSNDGSTTNNDIGMLSTMFMGSDHNTQEVGATSLVHERDLAEGNNQMGAPRFGVSNDMKTVHDFLGVGGSTSRATGNLHEPQRHHHHQQEQQRLELEALSQQRLPLINHFQHHIPHGDSTMEKSVWDI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02455 477 MobiDBLite consensus disorder prediction 417 440 - -
Adu02g02455 477 Gene3D Classic Zinc Finger 62 142 - -
Adu02g02455 477 SMART c2h2final6 49 79 IPR013087 -
Adu02g02455 477 SMART c2h2final6 84 104 IPR013087 -
Adu02g02455 477 SMART c2h2final6 6 28 IPR013087 -
Adu02g02455 477 Pfam Zinc-finger double-stranded RNA-binding 6 28 IPR022755 -
Adu02g02455 477 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Adu02g02455 477 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 440 - -
Adu02g02455 477 SUPERFAMILY beta-beta-alpha zinc fingers 5 104 IPR036236 -
Adu02g02455 477 MobiDBLite consensus disorder prediction 214 236 - -
Adu02g02455 477 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 1 440 - -
Adu02g02455 477 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02455 Adu-Chr2 90270970 90275263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02455 1 285 IDZ Gene Family AT3G50700 52.751 5.33e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu02g02455 zf-C2H2_jaz 6.9e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02455 - - ahf:112730641 887.1