Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02440 ATGGCTTCTAGAACACAGAGATGGAGCGAGCTGGAAGAGGACGACGAGAATCTCGATTTCCTTCTGCCGCCGAAGCAGGTCGTAGGCCCCGACCAGAATGGAATCAAGAAGGTCATTGAATACAAGTTCGCCGACGACGGCAGCAAGGTTAAGATCACCACCACAACACGCACTCGTAAGCTCGCTAACGCTCGCCTCAGCAAGCGCGCCATCGAGCGCCGCTCATGGCCTAAGTTCGGCGACGCCGTCCACGAGGACGTCGGTAGCAGGCTCACCATGGTCTCCACCGAAGAGATCCTCCTCGAGCGCCCTAAGCCCCTAGGTGCCAAAACTGAGGAACCAAAAGCTACTGGTGATTCATTAGGTCAGTTCCAGAAAGGTGCTGTTCTTATGGTCTGTAGGACTTGTGGGAAGAAGGGTGACCACTGGACTTCAAGGTGCCCCTACAAGGATCTTGCTCCACCGTCCGAGGGATTTGTCGACAAGCCTCCTACATCTGATGCTGCAGCTGCTGTTCCTGGTTCAACAAAGGGAGCATATGTGCCTCCTGGAATGAGAGCTGGTGCGGAGAGAACTGGATCGGACATGCGGCGCAGGAATGATGAGAACTCTGTGAGGGTCACTAACTTATCGGAGGACACAAGAGAGCCGGATTTGCTGGAACTGTTCCGCCCATTTGGCGCAGTGAGCAGAGTCTATGTTGCTATTGATCAGAAGACCGGCATGAGCAGAGGATTTGGATTTGTTAACTTTGTAAACAGGGAAGATGCACAGAGAGCAATTAACAAGCTCAATGGATATGGATATGACAATCTCATCCTCAGACCGCCGCACCCACCACAACCACTGGAGCCGCCGCACCCACCGCGACCACCGCAGCCCCACAACCCCGCGGAACCCACAGACACTAGATCTCCTCTGCTCGAGCGTGCTTTCTCTCTGTTCGCCGGTGTCGCACCGTGGAAGCTCCGTCGTCGTCGCAGGAACTGTCTCGCCGTCGTAGGAAGCTCCGTCACCGTCCTAGGAAGCTGTGTCGCCGTTGTAGGAAGCTCCCTCGCCGTCGCTTGGAAGCTCTGTGGCCGTCACCGTCTCCCCTGTTCAAGCGCTCTCTCTCTCTCTCTGTGTTCGCCGGTGTGGCCGTCTCCTTTGTCGTCGCCGTCACTCCCCTTCCTCCTCGCTGCCGGGAAGCATCTTCAAATTTCAGTCACAGCTGGTCTTCACTTCACTTCTCCAGATGTTATGGCTGATATTGATCCCCACACCTTGACCTGCCACGCCTGCGGAAACGTCGGTCTCGTCGACGGCGATGACGGATTTTTCTACTGCAACCGCTGCGGTTCCCGCTCCGAGGATGTTGTCGACACCGCCGTCGATGACAACGATCTCTACAAAAGCGGCGGCGCCTCCGCCGGCATATACCTCGCCAGCCAGCAGCGCTATCGAACTTCAACCGTCGGACTCAAAGCGGAACCAATCTCCCAGTACGACTCACAATCGGTTCTCCTCCGCAACCTCGGGTTGGACGACGAGGACAACCAAACCCCTGGCCGGAGCAACGCCGTCGAGGTGAAGAGAGAGGAGGAGAATTACGCTCCGCTTTTCGGCAATATTCACTCTGTTCCCGAAGATTTTGCTGACGTGGCTGGCGCCAATGTTCTGAGCTTTGAGGATTACCAGAATGAAGTTAGGATGAGGTACGTGTTAGGGTTGCAGATTATGGTTCAGCTTCAGTGTGAGGCGTTGGTTAAGGAGTTCAAGGTTACGCCTTTGATTTGCGGGTTGATGCAGCCCATTTGGTTGAGGTTCGTGTTCGGAACTGGTGTCTTCAATGATGATTGGGCTGATCAAGTTATCCATGACTCTGAGATGCAGCATGAAGAAGAAGAACCCAAAGATCGTAAGACACGGGCTAAATACAGAGATGAACCCTACAATTTATATGGTCAGCGTGCCGTGATGATATGGTTCAGGGCCTTAAAGAAAAGGATTCCACCATCCTGTACTCTTGCTGTTTCTTTTCTGGCATGTCATGTTGCAAGGGAACCTGTCCTGCCGTCTGACTTAATCAAGGGGACACTGGAAGCGAAGATTCCGTATATTTCTGCATTTGTTGAAATTGAAAAGCGTCTTGGACGGCCATCAAGTGCATGTCCTATTAGTTCAAGTGTGATGTTCAAGCCTCAGCGAGTTCTTATGGTGCTGAAACTAGAAACATTTGCTGCATCAATTGCTCAGTTCATAGGCTTGGAGTTACCTCCTGTGAATTTCTTTGGAATAGCACGTCGATATCTTCAGAGATTATCTCTTCCTTCTGAAAAGATTCTTCCTCATGTAAGCCGCATATATGAATGGGCCATGCCTCCAGATTTGTGGTTATCCTTATCCGAAAGACATTTTAAGCTACCTATTCATGTTTGTGTGATGTCAATTCTGGTTGTAGCAATAAGAATGTTGTTTAACATAAATGGTTCGGGAGAATGGGAGAAAAGTTTGTCCAACAAAGGTAATACCAAAGACAATGGTGAGAAGGGTACAGCTTTTTCCCCCCGTGATAGACCTAATTCTAGTGAAGAAGATTCGGATAAAGACAAAATGAAACAACAGGAAAATGAATTAGACACTTCAGGACTTCTCCAACACCTTCAAGCAATATATAATGATCTTGCAGATATCCAAGATTATTCAAAAGACCTGTCAACATATCTCAAACACTGTAGGGATGTTATCTTTGCTGGGTCAGAGGCGTCATATGGGAATTACAAAGAAGAAAAGATGATAGAGTACTTATGGAACTTTTATATGAATGAAAAGGATACTAAGCCTTCAGTACATGGAGAACAATCTAACAGGTCTCTTAATGAAACAAGGTCGAGGGATAATGCATCGGTTGGTAGGACATCTCAGAGGGAGAGGACAAGTAAAGAACATTCTAATCAGCCATCTCTTAATGACGCCACCAGCCTTGAAAATCATTTGCCTGAAAATGTGGATAAAGATGATGGGGACAATGACAAGGACAATGATTCCTCAAAGAGTTTTAGAGGCCGTGATGAATCAGATTCCAATGCGCACAGTTCAGAAAAACCTCATGTCAAGGAAGCCATTGCACGGATGAAGTTAGACATGGAGGAGAATAGGTTCTACTATATACCACCTATTGTCAAGAAGAAAAGACGACACAATTATCTTCACTATGTGAGGAAGATAGATGAAGGTGCCTTGGAGTATGTTGCTCATGCTGATTACTACATCCTGCTTCGGGCTTGCGCTAGGGTCGCACAAGTTGACGTTCGGATTATGCATATTGGTGTGTTGAAGCTCGAAAGAAGACTTGCTTGGTTAGAGGAACAGATCGACGAATGCTTGCAGTTGAAACCAGAGAAAATTTCGTGCAAGTTCTGCAGTGATGCGGCCCCTGAAAATGAATCTGATGATAGTTACCTGGAGTTCTTTGGGTGCTGCCGGATTCATATCTTGATGTTCCCAACAAGGACTATGGGGCTGGGTGACTTATTTGTTGATGGGAAAGTGATTCCAAGGCCGCAGTATAGATATTCTGAGAGGCAACCAACTAGGAGCAGACCTCGGCCACGGCATGACAGGCGTCGTGAAACAATGCAGGTTGAAAGGAGAGACCCTGTTCAAAGACAGGAATGGAACCAAAGTCAGGGAGGACCTATGCAGCAATCGACTCCAATGAACAGTCAAAACTCTCCTTCTGGTGGACCAAAATGTTAA 3738 0.4874 MASRTQRWSELEEDDENLDFLLPPKQVVGPDQNGIKKVIEYKFADDGSKVKITTTTRTRKLANARLSKRAIERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGAKTEEPKATGDSLGQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFVDKPPTSDAAAAVPGSTKGAYVPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRPPHPPQPLEPPHPPRPPQPHNPAEPTDTRSPLLERAFSLFAGVAPWKLRRRRRNCLAVVGSSVTVLGSCVAVVGSSLAVAWKLCGRHRLPCSSALSLSLCSPVWPSPLSSPSLPFLLAAGKHLQISVTAGLHFTSPDVMADIDPHTLTCHACGNVGLVDGDDGFFYCNRCGSRSEDVVDTAVDDNDLYKSGGASAGIYLASQQRYRTSTVGLKAEPISQYDSQSVLLRNLGLDDEDNQTPGRSNAVEVKREEENYAPLFGNIHSVPEDFADVAGANVLSFEDYQNEVRMRYVLGLQIMVQLQCEALVKEFKVTPLICGLMQPIWLRFVFGTGVFNDDWADQVIHDSEMQHEEEEPKDRKTRAKYRDEPYNLYGQRAVMIWFRALKKRIPPSCTLAVSFLACHVAREPVLPSDLIKGTLEAKIPYISAFVEIEKRLGRPSSACPISSSVMFKPQRVLMVLKLETFAASIAQFIGLELPPVNFFGIARRYLQRLSLPSEKILPHVSRIYEWAMPPDLWLSLSERHFKLPIHVCVMSILVVAIRMLFNINGSGEWEKSLSNKGNTKDNGEKGTAFSPRDRPNSSEEDSDKDKMKQQENELDTSGLLQHLQAIYNDLADIQDYSKDLSTYLKHCRDVIFAGSEASYGNYKEEKMIEYLWNFYMNEKDTKPSVHGEQSNRSLNETRSRDNASVGRTSQRERTSKEHSNQPSLNDATSLENHLPENVDKDDGDNDKDNDSSKSFRGRDESDSNAHSSEKPHVKEAIARMKLDMEENRFYYIPPIVKKKRRHNYLHYVRKIDEGALEYVAHADYYILLRACARVAQVDVRIMHIGVLKLERRLAWLEEQIDECLQLKPEKISCKFCSDAAPENESDDSYLEFFGCCRIHILMFPTRTMGLGDLFVDGKVIPRPQYRYSERQPTRSRPRPRHDRRRETMQVERRDPVQRQEWNQSQGGPMQQSTPMNSQNSPSGGPKC 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02440 1245 MobiDBLite consensus disorder prediction 1187 1216 - -
Adu02g02440 1245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 205 271 IPR000504 GO:0003723
Adu02g02440 1245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 203 275 IPR000504 GO:0003723
Adu02g02440 1245 CDD RRM_eIF3G_like 204 275 IPR034240 -
Adu02g02440 1245 SUPERFAMILY RNA-binding domain, RBD 166 275 IPR035979 GO:0003676
Adu02g02440 1245 PANTHER TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B 420 1136 IPR033599 GO:0001164|GO:0001188|GO:0006360|GO:0070860
Adu02g02440 1245 MobiDBLite consensus disorder prediction 274 303 - -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 1217 1245 - -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 829 871 - -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 275 299 - -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 963 977 - -
Adu02g02440 1245 CDD eIF3G 33 151 IPR024675 -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 163 204 - -
Adu02g02440 1245 SMART rrm1_1 204 275 IPR000504 GO:0003723
Adu02g02440 1245 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 5 283 IPR017334 GO:0003743|GO:0005737|GO:0005852
Adu02g02440 1245 Gene3D - 181 275 IPR012677 -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 1183 1245 - -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 939 1031 - -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 945 962 - -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 991 1031 - -
Adu02g02440 1245 MobiDBLite consensus disorder prediction 852 870 - -
Adu02g02440 1245 Coils Coil 1104 1124 - -
Adu02g02440 1245 Pfam Eukaryotic translation initiation factor 3 subunit G 26 152 IPR024675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02440 Adu-Chr2 90017560 90025624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02440 7 275 Eukaryotic Initiation Factors Gene Family AT3G11400 69.103 1.78e-135 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02440 - - ahf:112755517 1506.89