Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02420 ATGAAGGAAAAAGTGGATTCACCAGTTACAGTTCTTGAGGACTATTTCAGGTCCTCAGATTCATCAGAAACAAGTTGTTCAAAAGATCATGATCATAGTGGTTTGGATTCTGAGTCTCAAGAAATTTCAAGGCCAAGTTGTTCAAGGTGGCATTCATTTGTTCAAATTTTGAAGGGAAAATCATCATCCAAGAACAACACATTGTTGCACCCTTTGAACATATCAAGAAGAATGAGTAGTAGCATGAGAGAATCTCTATGGCCAAGTTGCCTCTTAGATGTTGCAAGCCCTTCACCTTGTAGGTCACCTTGGAAGATCTTCTCTCACCATGATATTCAACTAGCAACCAATCATTTCAGCCAAGAAAACTTGATTGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTACCAAATAATCAGCTTGTAGCAATTAAGAGGCTAACAAGAGGAACTGCTGATGAGATCATAGGTGACTTTTTATCAGAACTTGGAGTTATGGCACATGTGAATCACCCCAACACTGCTAAGCTTGTTGGTTATGGTGTGGATGGTGGAATGCACCTTGTTCTTGAATTGTCTGAGAAAGGGAGCTTAGCTTCACTGCTTTATGGTTCCAAGGAGAAATTAGCATGGTGCATCAGGCAAAAAATTGCAGTAGGAACAGCAAAGGGTATATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATTCATAGAGATATAAAAGCTGCAAATATATTGCTCACTGAGGACTATGAGCCTCAGATATGTGATTTTGGGCTAGCAAAATGGCTACCGGAGAATTGGACTCACCACACTGTTTCAAAATTTGAAGGAACTTTTGGGTACCTTGCACCTGAGTACTTGCTTCATGGAATTGTTGATGAGAAAACAGATGTATTTGCTTTTGGTGTGCTTCTATTAGAATTGGTCAGTGGAAGGCGTGCACTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCATTGCTGAGAAAGAATGAAATTAAGGAGTTGATTGATCCATCACTAGATGAAGAATTTGACACAAGGGAGTTGAATCTCATGTTATTGGCAGCTTCTTTGTGCATTCAACAATCTTCAATTCGCCGCCCCTCTATCAGACAGGTTGTTCAACTTTTAAATGGAAATCTCAACTGCTTTAAGGGCGTGAAGAAAACTAGATTTCCATTCTTCAGAAAAGTCTTCCAAGAAGAACTCCTTGATTCTGAATAA 1245 0.392 MKEKVDSPVTVLEDYFRSSDSSETSCSKDHDHSGLDSESQEISRPSCSRWHSFVQILKGKSSSKNNTLLHPLNISRRMSSSMRESLWPSCLLDVASPSPCRSPWKIFSHHDIQLATNHFSQENLIGKGGYAEVYKGCLPNNQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMHLVLELSEKGSLASLLYGSKEKLAWCIRQKIAVGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLRKNEIKELIDPSLDEEFDTRELNLMLLAASLCIQQSSIRRPSIRQVVQLLNGNLNCFKGVKKTRFPFFRKVFQEELLDSE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02420 414 MobiDBLite consensus disorder prediction 16 40 - -
Adu02g02420 414 Gene3D Phosphorylase Kinase; domain 1 93 193 - -
Adu02g02420 414 SMART serkin_6 119 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g02420 414 ProSiteProfiles Protein kinase domain profile. 119 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g02420 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Adu02g02420 414 Gene3D Transferase(Phosphotransferase) domain 1 196 397 - -
Adu02g02420 414 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 413 - -
Adu02g02420 414 PANTHER OS08G0249100 PROTEIN 1 413 - -
Adu02g02420 414 Pfam Protein kinase domain 120 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g02420 414 MobiDBLite consensus disorder prediction 23 38 - -
Adu02g02420 414 SUPERFAMILY Protein kinase-like (PK-like) 96 384 IPR011009 -
Adu02g02420 414 ProSitePatterns Protein kinases ATP-binding region signature. 125 147 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02420 Adu-Chr2 89798139 89803324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02420 106 380 Trihelix Transcription Factor Family AT1G68690 41.608 1.40e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Adu02g02420 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02420 - - gmx:100780587 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01031 06 12807100 12809157 Adu02g02420 02 89798139 89803324 PCT