Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02419 ATGATTCCATGGGGTGGAATAAGTTGCTGTTTGAGTGCAGCTGCTCTATACCTCCTTGGCAGAAGCAGTGGCAGGGATGCTGAGCTTTTTAAATCTGTAACAAGGGTCAATCAATTGAAGGAGCTGGCACAACTGTTAGATGCAGAAATCTTACCCTTGGTTGTTAGCATTTCTGGGAGAGTTAGCTCTGAAACCCTAATTCACTGTGAGTTCAGTGGTTTAAGAGGAGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAATGATGCTCGTTCATGGATACAAGATTCTGCTTTAATGTTATCCATGAGTAAAGAAGTTCATTGGTATCTGGCAGGTGATGCTGAAAAAGTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGATTGTTGTGCTAGATATTTGCACAGACTTACCAGCATGGCCAGGGAGACAGGAGGGAGAAGAAGAAAGAAGAAACAAGAACTCACAATGCTCAACTGCATGCTACCATCTCAGAGCTGCAGTGGCTTCTGCTGTGGCAGCCATCCCGGCTGCAATGGCTGCTTCATCTACACCAAGCAAGGATGAGAGGATGGCCAAGACTAGCGTGGCTGTGGCCTCTACAGCCACATTGGTGGTCGTGCAGTGCGTCGAGGCTACTGAGGCAATAGGGGCTGAGAGAGATCACCTAGCTTCTGTGAGGAGCAGCTACCCTGAAGGCAAGAGCATTGAAAGAGGTATGGAACATTGCTGCAGTGACACCATTAGAGAAAGGCAGGGAATGATTGGAATTTGTGGCAAAGGCGTCTGCAGCCAAGAGCTACTTGCTAAAGGAAGTGAATTACTCAAACAAACCCGTAAAAGTTACACAACATCAATCACAATTAAGGTGGTGACGGAGGAACGGAAAGAGATGCCATACGTGTGTTTCAAGACGCTAGACAAGTTTTATGGAATCGACGTCTGCGATTTGCTTTCTCCGCCCAAGGAGTTGGAGGACCAGGCGGTGCTGACTTGGGCTTCTCTTCCTCCGATTCCAGCTGCTTTCAAGGCTGATCTTCCGGCTTTCTGCGTGCAGCTTGTGGAGTTCGACTCCAACTTCTATCTCCTCGGAGGTCTTCAAAATCGTCCTACCGGCGATGCTCGTATCGGTCCTCCTTCGGTCAAAACATTCGAACTTCGTCTGGACGAAGATAATGAGAAACAGAAGCAGAAGCAGTTAACGTTCAAGGAGGTGGACTTAATCCATGAACCACCAATTCGCTACGCCAAGAGGGTGTTCGACTACGAAAAAATTAAGGGGGATTATTATTTCATCCAGTTCGATCCCATGATGCCTAAAATATCAAAGGATTCCTTCTGGGTTCTGCGCTCACAAACACATGACTGGCAATCTCTACCGTCTCCTCCCGACTTGGGCCTCGATGTTTATGATGTATTTGAAACAAATCATTTTGTGTATGGTGAAAGAATATATTTTCAAACCATTTATATGACAGATGATGCATTTATGGAATTTATGGAATTAAAGAGCAAAACTCCTTCACCCAATGTTGGACAGTTTGAAAGCGTGCTCTTCTATTCCTTTGATACATCCTTGGGAGGTGGGACATGGACTATACAGGGGGGAGCTGATGCATTCATAGAATCTTTCAGATTTACTGTTCAGGGCAGACAGCGCTTCCACCGTCCCATTACACTGCCTCTTCCAGTCCGCAGGGATTATAGTCTTCATCTCTCTACTTCTGACATTGAAAGATCCGATCATTTTGGTGAATGGAAAAATGGGTATAAAGCAACCTTACATGCCTTGCTTGTGAACAAAAGAGGTGTTCGATTTGTTCAGCCAATCGAGGGTTGTTTTGAGGGCATCCAACCTGCATTTTATGCTGCATGTCCGACTCTCGTCTACCTTGGTAACAACATGGTTTGTGCCATGTTAATTGGCTTTCTAGATGAGCATCATAAACGTAGATGTCCATTAATTTGTGTTTCTATATTTCATTTATCTATCATGGAGGATGCTATTGATATGGATTACATTAACAGTCCTGTTCCTAAAAAGGTTCATAATTTCTTAACTGTTAATGTAATGAGGAGAAATGTCTATTCCATGGTAGATTATTTGGAAACACATTTAATACTGAGAGACGTGTACCCATTGATAGATGAAATTAAGGAATTTCTTTGGAAAGAGTCAAAGGATCCTCTCTCTCCTGTGTCAAAGAAGCCAAAGCTCATCTAG 2253 0.4372 MIPWGGISCCLSAAALYLLGRSSGRDAELFKSVTRVNQLKELAQLLDAEILPLVVSISGRVSSETLIHCEFSGLRGVIVEETAEQHFLKHNDARSWIQDSALMLSMSKEVHWYLAGDAEKVKMKSRHVAGTITKKKKIVVLDICTDLPAWPGRQEGEEERRNKNSQCSTACYHLRAAVASAVAAIPAAMAASSTPSKDERMAKTSVAVASTATLVVVQCVEATEAIGAERDHLASVRSSYPEGKSIERGMEHCCSDTIRERQGMIGICGKGVCSQELLAKGSELLKQTRKSYTTSITIKVVTEERKEMPYVCFKTLDKFYGIDVCDLLSPPKELEDQAVLTWASLPPIPAAFKADLPAFCVQLVEFDSNFYLLGGLQNRPTGDARIGPPSVKTFELRLDEDNEKQKQKQLTFKEVDLIHEPPIRYAKRVFDYEKIKGDYYFIQFDPMMPKISKDSFWVLRSQTHDWQSLPSPPDLGLDVYDVFETNHFVYGERIYFQTIYMTDDAFMEFMELKSKTPSPNVGQFESVLFYSFDTSLGGGTWTIQGGADAFIESFRFTVQGRQRFHRPITLPLPVRRDYSLHLSTSDIERSDHFGEWKNGYKATLHALLVNKRGVRFVQPIEGCFEGIQPAFYAACPTLVYLGNNMVCAMLIGFLDEHHKRRCPLICVSIFHLSIMEDAIDMDYINSPVPKKVHNFLTVNVMRRNVYSMVDYLETHLILRDVYPLIDEIKEFLWKESKDPLSPVSKKPKLI 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02419 750 Pfam Auxin canalisation 106 240 IPR008546 -
Adu02g02419 750 PANTHER - 1 124 IPR044231 GO:0004842|GO:0016567
Adu02g02419 750 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 1 124 - -
Adu02g02419 750 Pfam Plant pleckstrin homology-like region 120 160 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02419 Adu-Chr2 89749482 89757867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02419 1 130 C3H Transcription Factor Family AT1G63900 71.429 4.01e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02419 K15688 - ahf:112729256 872.078