Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02393 ATGGATTATGGTAATAATAAGTACACTATTCCAATACCTGGAATCAAAGTTTTGGTGGTGGATTGTGATTCAACATCTCTAACATTGGCATCTAAAATGCTTCGTATCCTTGGATATGAAGTTGTGACTGCTAAACTAGGTTCTGATGCTTTATCAATTATTGAGAAGAATGAGCTTCACCTTGTGATCATGGAGATTCATTTGCCTGACATGAAAATGTTTGAACTCATTGACAAAATCAGAGAAAGCTATGACATCCCATCTTTCATTATGAGTGCTGATGAAAATCAAACTTCAAAGTCAAAAGCACTAAGCAAAGGAGCTAAACTCTATTTCATAAAGCCACTTCTACTTTCTGATTTAAAGGGCCTCTGGAAATTTGCATCATGCAACACAAAAGTTTCAACAGTATCCACTGATCAAAATGGATCAAAGGGTATCACAGTGAACAAGGATCAAGAATGCAAACCACTGAATAATAATAATAACAAAGAGAAAAAACAAGAACTTGTTGAATCATCAGTGGTCCAGAGAAGGAAAAGAATTAGGTGGACTGATCATTTGCATATGAAGTTCATGGAAGCTGTTATCTTAGCAGGATCTGGTGCTGGTCCTAAGAAAATACATGAGTATATGAATGTGCCAGGAGTCACAAAAGAGCATGTTTCAAGCTATTTACAGAAATATCGCCAATCTTTGAAAGCGCAAGATAGTGAAATTCAATATCAAAGGAAAATGCTATCATCTGAGTTGAATTTAAGATCATACCAATTGAAGGATCTCTTCCATTGCAAGTCAGAGCAATTTCTTGATGCTCCTGCACATCTTCCTTCCACAAAAATTCCAACTGTTCATGAACCAGCTTTGAGCCAAAACCAATTACTCCCAGGGACACTGGTGCAAGGTGAGATGAATGGCAATGGTGTGGAATCTGTGGAGATTAGCCAAGAAGAAAGTTATACTAATGGAAGAGTTTCtgaagaagatcaattagacccaagtgaagattttgaaacaataatgacaaatactgagccttgtttcactagctggagtcggctacttgATCCTGAAGAAACTTCTTACGAGGTTTCCTCTAAGGATTATACTGCTGAAAACAGTGAATTGAATTGTTCGATGCCGATGGAGAATGATATGTGTCAACAGTTTCCTGCATTTCCTTCAGTACCATCAGGAAATGTTGATGAGATCTTCAATATTTCAAAGGAAACTGAGAATGCCTGTGATGAGGATTTAGATAGTTGGCTAAAAAGCTTATAG 1281 0.3443 MDYGNNKYTIPIPGIKVLVVDCDSTSLTLASKMLRILGYEVVTAKLGSDALSIIEKNELHLVIMEIHLPDMKMFELIDKIRESYDIPSFIMSADENQTSKSKALSKGAKLYFIKPLLLSDLKGLWKFASCNTKVSTVSTDQNGSKGITVNKDQECKPLNNNNNKEKKQELVESSVVQRRKRIRWTDHLHMKFMEAVILAGSGAGPKKIHEYMNVPGVTKEHVSSYLQKYRQSLKAQDSEIQYQRKMLSSELNLRSYQLKDLFHCKSEQFLDAPAHLPSTKIPTVHEPALSQNQLLPGTLVQGEMNGNGVESVEISQEESYTNGRVSEEDQLDPSEDFETIMTNTEPCFTSWSRLLDPEETSYEVSSKDYTAENSELNCSMPMENDMCQQFPAFPSVPSGNVDEIFNISKETENACDEDLDSWLKSL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02393 426 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 348 IPR045279 GO:0009736
Adu02g02393 426 ProSiteProfiles Response regulatory domain profile. 16 129 IPR001789 GO:0000160
Adu02g02393 426 SMART REC_2 15 125 IPR001789 GO:0000160
Adu02g02393 426 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 180 231 IPR006447 GO:0003677
Adu02g02393 426 SUPERFAMILY Homeodomain-like 177 234 IPR009057 -
Adu02g02393 426 SUPERFAMILY CheY-like 13 127 IPR011006 -
Adu02g02393 426 Gene3D - 175 235 - -
Adu02g02393 426 Gene3D - 12 133 - -
Adu02g02393 426 MobiDBLite consensus disorder prediction 152 172 - -
Adu02g02393 426 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 14 348 - -
Adu02g02393 426 MobiDBLite consensus disorder prediction 158 172 - -
Adu02g02393 426 Pfam Response regulator receiver domain 17 121 IPR001789 GO:0000160
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02393 14 265 Response Regulator Gene Family AT2G25180 31.618 2.13e-31 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu02g02393 Response_reg 1e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02393 - - ahf:112728429 784.252